Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0677 ATGAATTTTTGGAAGTGGGGTTTCGGTGGAATCCTTTTTGCTACTTTTTTTTTCACAATTGGTGCTGTTGAGCTTGGTCGAAATCATCTTACTGAGAGAATTTCAGGTAGTGCTGGTGATGTGCTGGAAGATAATCCAGTGGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCAAGCAAATATAATAAGAAAATTCTGCAAAAGGACCCAAGATGCCTCACTCACATGTTTGCTGCTGAGATCTTTATGCATAGGTTTCTCTTATCGAGCCCTGTCCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATACACAACCTGTGATTTGACACCAAATGGTCTTCCTTTACCTTTTAAGTCACCGCGAATGATGAGAAGTGCCATACAGCTTATTTCTTCAAACTGGCCATATTGGAACAAGACAGAGGGCGCAAATCATTTCTTTGTGACCCCTCATGACTTTGGGGCATGCTTCCATTACCAAGAAGAGAAGGCGATTGAAAGAGGTATTCTTCCATTGCTACAGCGTGCTACCTTGGTTCAAACATTTGGACAGAGGAATCATGTGTGCTTGAAAGATGGCTCAATCACCATTCCTCCATATGCTCCACCGCAGAAAATGCACGCCCACCTAATTCCTGAAAAGACTCCTAGATCCATTTTTGTTTACTTCCGGGGACTGTTCTATGATGTTGGAAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCCACTATTCGACATTTCCACTGATCATCCAACCACATACTATGAGGACATGCAACGAGCCGTGTTTTGTTTGTGTCCACTTGGATGGGCCCCTTGGAGTCCGAGACTGGTTGAAGCTGTGGTATTTGGTTGCATCCCTGTTATTATTGCGGATGAAATCGTTCTTCCATTTGCCGATGCAATCCCATGGGAAGATATAGGGGTGTTTGTCGATGAGGAGGATGTTGCTCAGTTAGATACTATACTTACATCTATCCCACCAGAAGTTATCTTAAGGAAACAAAGATTGCTTGCAAACCCTTCCATGAAGCAAGCCATGCTTTTCCCACAACCTGCTAAACCAGGTGATGCTTTTCATCAAGTTTTGAATGGGCTTGCGCGAAAATTGCCGCATGACAGGAGCATATTCTTGAAACCAAGGGAGAAGGTTTTGAATTGGACTGCTGGTCCTGTGGGTGACCTTAAACCTTGGTAG 1251 0.4365 MNFWKWGFGGILFATFFFTIGAVELGRNHLTERISGSAGDVLEDNPVGRLKVFVYELPSKYNKKILQKDPRCLTHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNKTEGANHFFVTPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQRNHVCLKDGSITIPPYAPPQKMHAHLIPEKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTDHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADEIVLPFADAIPWEDIGVFVDEEDVAQLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAKPGDAFHQVLNGLARKLPHDRSIFLKPREKVLNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0677 416 Pfam Exostosin family 49 344 IPR040911 -
Lal4g0677 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 8 410 IPR004263 GO:0006486|GO:0016757
Lal4g0677 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 8 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0677 Lal-Chr4 5266286 5270501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0677 K20870 - gmx:100797122 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0677 4 5266286 5270501 Lal21g0692 21 5455156 5473660 ECH
Lal4g0677 4 5266286 5270501 Lal4g0677 4 5266286 5270501 ECH
Lal17g0811 17 5928022 5931315 Lal4g0677 4 5266286 5270501 LSH
Lal21g0692 21 5455156 5473660 Lal4g0677 4 5266286 5270501 LSH