Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0628 ATGGTGATGGAAATGCCGAAAGGGTTACCTTTCTCTGTAGACACATGGAGTCAATCATCTAAGGCTACAAAGAGGCATCATTTTCTCACACATGCTCATAAAGATCATTCTTCTAATATTACTTCTTTTTCTTCTTTCCCTATTTACTCTACCCTTCTTACTAAAACCCTAATCCTTCAACATTACCCTCAGCTTGATGATTCATTGTTTGTGAGTATTGAGGTGGGTCAGTCTTTGATTGTTGAAGATCCTCATGGTTCCTTCACTGTCACTGCTTTTGATGCTAATCACTGCCCTGGTGCTGTGATGTTCTTGTTTGAAGGCAAATTTGGTAATATTCTGCACACTGGGGATTGCAGGCTTACCCCTGAGTGTCTCTACAACTTACCTGGCAAGTATGTTGGCAAGCAAGGAAAACAACCACGCTGCCGACTTGATTGCGTATTCTTAGACTGTACTTTCGGCAACTTCTCTCATGGGATGCCTAGCAAACACTCTTCTATTCAACAGGTTATTAATTGTATATGGAAGCATCCTGATGCATCGATGGTGTATCTAACCTGTGACATGCTCGGTCAGGAAGAGATCCTTGTTAATGTGTCCCAAACATTTGGAGCGAAGATATATGTTGAAGATCCAGAACGTTTCAAGAATCTAGCAGTTACTACTCCTGAAATCCTCTGTGAAGATCCCTCTTCCCGTTTCCATTTGTTTGATGGATCTCCAGGACTATATAAAAGGGCAAGAGTGAAGTTGGTTGAGGCCAAGGCAGCTCTCCAACCAGAGCCTCTCATTGTTCGACCTTCTGCACAGTGGTATGCTTTGGAAGATGATGCCTCAGACATGGAAAATTCTAGAAAAAAGAGGATGGATGAAGCAGTTAAGGATCAGTTTGGTGTTTGGCATGTCTGTTATTCAATGCACTCATCCAAGGAAGAATTAGAATGGGCCCTTCAACTTCTTGCACCTAGTTGGGTTGTTTCAACAACCCCCAGCTGCAGGGCTATGGAGCTGAGTTACGTTAAGAAACACTGTTTTAACTCCAAAGTTTCTCTCAATAACTCTATCTTGAAGCTTCTGGATATGACAGTAGAAACTTCTGATAACGTTGATACATTGGTCAAATCAGTAAGCTGTTATCCTGTGCTTGAAGGGACCCCTCAGCCTTGTGTGCAAACTAAATCACCAGTCAAACATTGCACTGAAAGTAAAGCACCTGTAGAATTGTCTCCTCCTGGCAAAAGCTTGCCTGTCACGTTGTTCGGAAGAGCAAGGCTCAGTCTCCAAGATGTCGCTTTTTCATGGGGGTGTAATACTTTACCTACCAATATCTGTTCACAAACAGTTTCAAGTGACACGAGACAAGAATTATCTAGCAGTGTGTTGGATGCTGAAACGAAATGGGAGAGGTCACCCGAAATAAAGGAAGATTTAGATGAAGTGAAGTATATGCAATCTGAGGTTCAGGAGACAAGAGTTCATAAGAGTGCCTCTTATTTAAATGTTGGATCTTCAGGCTTAAGTGAAAGTGTCAGAAAGTTGTACAGGTCAATGAATGTCCCTGTACCTCAACCTCTCCCCTCCTTGGTGAATCTTATGAATTCCTATAAATGTGCCAAGAGGGGAAACGATTGTTAG 1638 0.4219 MVMEMPKGLPFSVDTWSQSSKATKRHHFLTHAHKDHSSNITSFSSFPIYSTLLTKTLILQHYPQLDDSLFVSIEVGQSLIVEDPHGSFTVTAFDANHCPGAVMFLFEGKFGNILHTGDCRLTPECLYNLPGKYVGKQGKQPRCRLDCVFLDCTFGNFSHGMPSKHSSIQQVINCIWKHPDASMVYLTCDMLGQEEILVNVSQTFGAKIYVEDPERFKNLAVTTPEILCEDPSSRFHLFDGSPGLYKRARVKLVEAKAALQPEPLIVRPSAQWYALEDDASDMENSRKKRMDEAVKDQFGVWHVCYSMHSSKEELEWALQLLAPSWVVSTTPSCRAMELSYVKKHCFNSKVSLNNSILKLLDMTVETSDNVDTLVKSVSCYPVLEGTPQPCVQTKSPVKHCTESKAPVELSPPGKSLPVTLFGRARLSLQDVAFSWGCNTLPTNICSQTVSSDTRQELSSSVLDAETKWERSPEIKEDLDEVKYMQSEVQETRVHKSASYLNVGSSGLSESVRKLYRSMNVPVPQPLPSLVNLMNSYKCAKRGNDC 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0628 545 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 473 541 - -
Lal4g0628 545 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 1 447 - -
Lal4g0628 545 SUPERFAMILY Metallo-hydrolase/oxidoreductase 26 336 IPR036866 -
Lal4g0628 545 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 473 541 - -
Lal4g0628 545 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 1 447 - -
Lal4g0628 545 Gene3D - 9 329 IPR036866 -
Lal4g0628 545 Pfam DNA repair metallo-beta-lactamase 226 333 IPR011084 -
Lal4g0628 545 Gene3D - 160 308 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0628 K15340 - gmx:100807948 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0628 4 4674819 4679282 Lal4g0628 4 4674819 4679282 ECH