Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0624 ATGTCACATCTAAAGGCGGCACAAAAGGCGTTCGATCTAGCACGACGGCCGTCAAGGAGCTCAGCATTGACGACATTCTCAACGGAAGTATTTGATCATGATGTGGTACCATCATCATTAGCATCCATTTCGCCCATTCTCCGAGTAGCAAATGAGATCGAAAGGGAGCGCCCAAGGGTTGCATATCTATGTCGTTTCTATGCGTTCGAGAAGGCTCACAGATTAGATCAGAGCTCCAACGGGCGTGGTGTGAGGCAGTTTAAGACCTTGTTGCTGCAGAGATTAGAGAGGGAAAATGCCTCAAGTCTTGCCTCTCGGCATAAGAAGACAGATGCAAGGGAAATCCAAGCTTATTATCAGCAATACTATGAGCGTTATGTCAGAACTCTTGACCAAGGAGAGCGAGCTGACAGAGCACAGCTCGGTAAAGCTTACCAGACTGCCGGGGTGCTTTTTGAAGTGCTTTGTGCTGTTAACAAGTCCGAGAAGGACGAAGAAGTCGCTCCTGAGATTATTGCAGCTGCTAGAGATGTCCAGGAAAAGACGGAGATTTACGTGCCTTTTAACATTCTTCCATTGGATTCTGCCGGGGCTTCTCAGCCAATTATGCAACTTGAGGAGATTAAGGCAGCAGTTTCTGCGCTCTGCAGCACTCATGGTTTGAACTGGCCTAGTTCATTTGAACAGCAGAGGCTAAGAACTGGAAATTTGGACATGCTTGATTGGCTTAGGGCCATGTTTGGGTTCCAGGCATACAATGTCAGGAACCAAAGAGAGCATTTGATTCTGCTTCTCGCTAACAATCACATTAGGTTACACCCCAAACCCGAGCCTCTCAACAAGCTTGATGATCGCGCTGTTAATACAGTGATGACTAATCTCTTTAAGAATTACAAAACGTGGTGCAAATTTTTAGGACGAAAACATAGTTTACGACTCCCTCAAGGTCAGCCAGAGATACAGCAGAGGAAGTTACTTTATATGGGATTGTATCTTCTCATATGGGGTGAAGCAGCCAACGTACGCTTCATGCCAGAGTGTATATGCTATATATTTCACAATATGGCATATGAACTTAATGGCTTATTAGCTGGAAATGTCAGCGTTGTTACCGGTCAAAATATTGAACCTTCTTATGGTGGTCACGATGAGTCATTCCTGCACAAGGTTATAACTCCCATATACCGAGTGATTGAAAAGGAAGCAAGGAAGAGCAAAAATGGAACAGCTCCTCACTCAAGCTGGTCCAACTATGATGATCTAAATGAGTCACCTGATTGCTTTTCCCTTGGATGGCCCATGCGAGATGATGGTGAATTTTTTAAAGCAACGTTTGATTCAGCACAGGGAAGAATGGGCGTTCTTAAAAAATCTAGAAGAACTGGAAAGTCAAATTTTGTTGAGACCCGGTCATTCTGGCACATCTTCCGCTCTTTTGATCGTGTTTGGACCTTCTATTTACTGGGTTTGCAGGCAATGGTCATTCTTGCATGGAAAGAGATTTCACTGGTTGATGCCTTTCAGAAAGATATCTTATATAATCTCTCTAGTATATTCATCACAGCAGCCATTCTCCGCTTACTTCAAAGTATCTTGGACATGGCCTTGAACTTTCCAGGCTTTCATCGATGGAGATTTACCGATGCACTACGAAGTTTTCTCAAAATCATTGGTAGTCTTTTTTGGGTCATCCTTCTTCCACTCCTTTACGCGCATTCTGTCCAAAGTATCCCGGACAGTATCAAGAAGTTGATTTCCTTTATACCAACAAAGGGCAGCATACCACTTTATATCCTGGCCGTAGCACTATATCTGCTTCCAAATTTACTAGCAGCTGTTTTCTTTCTTTTCCCAATGCTCAGGCGTTGGATTGAAAATTCAGATTGGCACATAGTTAGATTCCTCTTATGGTGGTCACAGCCAAGATGCTATGTCGGAAGAGGAATGCATGAAAGTCAATTCGCTCTCTTAAAGTACACTATTTTCTGGGTGATCCTTTTGGCTTCCAAATTCGCGGTCAGCTATTTCATCCAGATCAAACCTCTAATTAAGCCAACTAAGGAGATAATGAGTATTCAACGTGTTGATTATGCTTGGCATGAGTTCTTCCCAAATGCTAAAAAAAACTATGGTGCAGTTATTGCACTCTGGGCTCCAGTAATTATGGTTTATTTCATGGACACTCAAATTTGGTATTCGATCTACTCAACTGTGTGTGGTGGTGTCATTGGAGCCTTTGATCGTCTCGGAGAGATACGCACTCTAAGCATGCTAAGATCGCGGTTTCAGTCATTGCCTGGTGCTTTCAACACATACTTGGTTCCGACTGACAATAAGCAGAAAAAGGGATTCTCTTTCTCAAAGCGATTCGATGAGATTTCTGCAAGCAAGAGGAGTGAAGCTGCTAAATTTGCCCAATTGTGGAACGAAGTTATGTGTAGTTTCCGTGAGGAAGATATCATAAGTGACAGGAAAGGCCTCAGAATTAAACTATGTTTGCATCACTCCAGGGAGATGGATCTTTTGGTGGTTCCTTATTCATCAGATCCTAGCCTGAAAGTAATTCAGTGGCCACCGTTTCTTCTCGCAAGCAAGATTCCAATAGCACTGGATATGGCAGCTGAATTTCGAGGAAAGGACTCCGATCTTTGGAAGCGTATATGTGCAGATGAATATATGAAGTGTGCTGTGATTGAATGCTATGAATCTTTTAAACATGTTCTCGATTACTTGGTGGTTGGAGATGCTGAAAAAAGGATAATCACTGTCATCATTAAGGAAGTCGAAAGCAACATCTCTAAGAATACACTTCTTACAAATATTAGAATGGGATTTTTGCCCTCCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATTTTGAAAGAAGCAAATCCATCCAAGCGAGGTTCAGTGGTTGTCTTGTTGCAAGACATGTTAGAAGTGTTTACTCGTGATATGATGGTGAACGAGATCAGTGAGTTGGTAGAACTGAATCAAAGTAGTAAAGATTATGGAAGGCAACTTTTTGCTGGTGCTAATTCAATACCGGCTGTTCAATTCCCTCCCACGGTTACAGCACAATGGGAGGAACAGATTAGACGCCTTTATTTACTCTTGACGGTGAAGGAATCTGCTATTCAGGTTCCAACAAATCTTGAAGCACGTAGAAGGATTGCATTCTTTACCAACTCATTATTCATGGATATGCCATGTGCTCCACGAGTTCGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACTGTCTATTCTAAAAATGACCTTGAGGTTGAAAACGAAGACGGTGTATCAATCATATATTACCTGCAAAAAATCTTCCCTGATGAGTGGACTAACTTTATAGAGCGACTTGATTGTAAGAAAGAAAGTGAGGTATGGGAGACTGAGGAGAATATATTGCAGGTTCGTCATTGGGCCTCGTTACGAGGACAAACTCTTTCCCGGACAGTTAGGGGAATGATGTACTACAGGCGAGCTCTTAAGCTCCAGGCTTTTCTTGATATGGCTAATGATAAGGAGATACTTGATGGCTATAAAGCTATAACTGTTCCATCTGAGGAAGAAAAACAAAGTAAGAGATCCCTGTATGCCACTTTAGAGGCTGTATCTGACATGAAATTCACATACGTCGCCACCTGTCAGAACTATGGGAATCAAAAGCGTAGCGGAGACCGCCGTGCAACAGATATCCTGAATTTGATGGTTAACAATACCGCTCTCCGTGTGGCATATATTGATGAAGTTGAAGAAAGAGAAGGCGGAAAAGTAAAGAAAGTTTACTATTCTGTACTGATCAAAGCTGTGGACAATCTTGATCAAGAAATATATAGAATAAAACTGCCGGGTCCAGTAAAATTAGGAGAAGGGAAGCCTGAAAATCAAAACCATGCAATCATTTTTACTAGAGGGGAAGCTCTTCAGACTATTGATATGAACCAGGATAATTACTTGGAAGAAGCGTTCAAAATGCGCAACCTTCTTGAAGAATTTAATGAGGATCACGGGGTGCGGCCACCGACCATATTAGGTGTTCGTGAGCATATCTTTACTGGCAGTGTCTCTTCCTTGGGTTGGTTTATGTCAAATCAAGAGACAAGCTTTGTTACAATTGGTCAAAGAGTTCTTGCAAGACCTCTGAAGGTGCGATTCCACTATGGTCATCCGGATGTTTTTGATAGAATGTTCCACATTACCCGTGGAGGAATGAGCAAGGCTTCTCGTGGCATCAATCTCAGTGAGGATATTTTTGCTGGGTTTAACTCGACACTAAGACGCGGGAATGTTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGAGATGTTGGGCTCAATCAAATCTCACTTTTTGAAGCAAAAGTGGCCTGTGGTAATGGAGAGCAGATACTAAGCAGGGATATCTACCGGCTGGGGCATCGTTTTGACTTTTTCCGCATGTTATCATTTTATTTTACCACCATTGGATTTTATATCAACTCAATGATTGTGGCGCTCACAGTTTATGCATTCCTATATGGCAGACTTTACCTGTCATTGAGTGGACTTGAGAGTTCAATAATTAAGTTAGCTAGGACAGCAGGAAATGGTGCACTACAGGCAGCAATGGCTTCACAATCCCTTGTCCAAGTAGGACTTTTAATGACTTTGCCCATGATCATGGAAATTGGATTGGAGAGAGGCTTCAGAAGTGCTTTAGGTGACTTCATAATATTGCAGTTGCAACTAGCACCTGTTTTCTTCACTTTCTCGCTAGGGACCAAAATGCACTATTTCGGGCGCACTCTCCTTCATGGGGGTGCAAAGTATAGAGCCACTGGGCGTGGTTTTGTCGTTCGCCATGAGAAGTTTGCTGAAAATTATAGGATGTTCTCTAGGAGTCACTTTGTAAAAGGGGTTGAGCTCTTAATCTTGCTCATATGTTATACGATCTATGGAGTGTCTGCAGTTAATTCAACATTGTATATCCTTCTCTCATTGTCAATGTGGTTTATGGTTTTTTCTTGGTTGTTTTCTCCCTTCATCTTTAATCCATCAGGATTTGAGTGGCAGAAGATAGTTGAGGACTGGGATGACTGGCAAAAATGGATAAGTAACCGAGGTGGTATTGGTGTTCCTTCAATCAAGAGTTGGGAATCATGGTGGGATGAGGAACAGGAACACTTGCAGCACACTGGGTTTATGGGGCGGGTTTGTGAGGTTATTCTTGCCTTACGTTTCTTTATCTATCAGTATGGGATTGTGTATCATCTCCATATAGCCAGAGGTGACAAGAGCATCATGGTTTATGCTTTGTCCTGGATAGTGATATTAGCTGTCATGATTATCTTGAAGATTGTGTCCTTGGGTAGAAAGAGGTTCAGTGCAGATTTCCAGTTGATGTTTCGTCTTCTCAAATTGTTTCTGTTTATTGGAGCCATTATTGCACTTGGCTTAATGTTTACTCTGCTTAGTCTCACAGTTGGAGACATCTTTGTGAGCCTCCTAGCATTTTTGCCAACAGGATGGGCAATTCTACAGATAGCACAAGCATGTAAGCCATTTGTGAAGGGAGTTGGAATGTGGGGGTCTGTCAAAGCTTTAGGAAGGGGCTATGAATACTTGATGGGAGTGACAATCTTTGCACCAGTGGCCATCCTGGCTTGGTTCCCATTTGTTTCCGAATTCCAAACTAGGCTTCTATTCAACCAAGCGTTCAGCCGAGGGCTTCAAATCCAGCGCATTTTAGCCGGTGGAAAGAAGCAGAAGCAAGGCTAA 5787 0.4246 MSHLKAAQKAFDLARRPSRSSALTTFSTEVFDHDVVPSSLASISPILRVANEIERERPRVAYLCRFYAFEKAHRLDQSSNGRGVRQFKTLLLQRLERENASSLASRHKKTDAREIQAYYQQYYERYVRTLDQGERADRAQLGKAYQTAGVLFEVLCAVNKSEKDEEVAPEIIAAARDVQEKTEIYVPFNILPLDSAGASQPIMQLEEIKAAVSALCSTHGLNWPSSFEQQRLRTGNLDMLDWLRAMFGFQAYNVRNQREHLILLLANNHIRLHPKPEPLNKLDDRAVNTVMTNLFKNYKTWCKFLGRKHSLRLPQGQPEIQQRKLLYMGLYLLIWGEAANVRFMPECICYIFHNMAYELNGLLAGNVSVVTGQNIEPSYGGHDESFLHKVITPIYRVIEKEARKSKNGTAPHSSWSNYDDLNESPDCFSLGWPMRDDGEFFKATFDSAQGRMGVLKKSRRTGKSNFVETRSFWHIFRSFDRVWTFYLLGLQAMVILAWKEISLVDAFQKDILYNLSSIFITAAILRLLQSILDMALNFPGFHRWRFTDALRSFLKIIGSLFWVILLPLLYAHSVQSIPDSIKKLISFIPTKGSIPLYILAVALYLLPNLLAAVFFLFPMLRRWIENSDWHIVRFLLWWSQPRCYVGRGMHESQFALLKYTIFWVILLASKFAVSYFIQIKPLIKPTKEIMSIQRVDYAWHEFFPNAKKNYGAVIALWAPVIMVYFMDTQIWYSIYSTVCGGVIGAFDRLGEIRTLSMLRSRFQSLPGAFNTYLVPTDNKQKKGFSFSKRFDEISASKRSEAAKFAQLWNEVMCSFREEDIISDRKGLRIKLCLHHSREMDLLVVPYSSDPSLKVIQWPPFLLASKIPIALDMAAEFRGKDSDLWKRICADEYMKCAVIECYESFKHVLDYLVVGDAEKRIITVIIKEVESNISKNTLLTNIRMGFLPSLCKKFVELVEILKEANPSKRGSVVVLLQDMLEVFTRDMMVNEISELVELNQSSKDYGRQLFAGANSIPAVQFPPTVTAQWEEQIRRLYLLLTVKESAIQVPTNLEARRRIAFFTNSLFMDMPCAPRVRKMLSFSVLTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIFPDEWTNFIERLDCKKESEVWETEENILQVRHWASLRGQTLSRTVRGMMYYRRALKLQAFLDMANDKEILDGYKAITVPSEEEKQSKRSLYATLEAVSDMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNTALRVAYIDEVEEREGGKVKKVYYSVLIKAVDNLDQEIYRIKLPGPVKLGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEAFKMRNLLEEFNEDHGVRPPTILGVREHIFTGSVSSLGWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRMFHITRGGMSKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQILSRDIYRLGHRFDFFRMLSFYFTTIGFYINSMIVALTVYAFLYGRLYLSLSGLESSIIKLARTAGNGALQAAMASQSLVQVGLLMTLPMIMEIGLERGFRSALGDFIILQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFAENYRMFSRSHFVKGVELLILLICYTIYGVSAVNSTLYILLSLSMWFMVFSWLFSPFIFNPSGFEWQKIVEDWDDWQKWISNRGGIGVPSIKSWESWWDEEQEHLQHTGFMGRVCEVILALRFFIYQYGIVYHLHIARGDKSIMVYALSWIVILAVMIILKIVSLGRKRFSADFQLMFRLLKLFLFIGAIIALGLMFTLLSLTVGDIFVSLLAFLPTGWAILQIAQACKPFVKGVGMWGSVKALGRGYEYLMGVTIFAPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQKQG 1928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0624 1928 SMART FKS1_dom1_2 322 435 IPR026899 -
Lal4g0624 1928 Pfam Vta1 like 42 174 IPR039431 -
Lal4g0624 1928 Pfam 1,3-beta-glucan synthase component 1048 1742 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Lal4g0624 1928 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 9 1925 - -
Lal4g0624 1928 Gene3D - 27 185 IPR023175 -
Lal4g0624 1928 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 324 423 IPR026899 -
Lal4g0624 1928 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 9 1925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0624 Lal-Chr4 4623619 4638022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0624 15 1926 Glycosyltransferase AT1G05570 60.256 0.0 2398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0624 K11000 - gmx:100777245 3302.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0624 4 4623619 4638022 Lal4g0624 4 4623619 4638022 ECH
Lal21g0663 21 5106548 5124427 Lal4g0624 4 4623619 4638022 LSH
Lal4g0624 4 4623619 4638022 Lal14g1375 14 15125786 15139714 PCT