Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0588 ATGGGTGAGGGAGAAAAATTTCAGCTTGGAACTGTTGGAGCTTTGTCTCTATCAGTGGTGTCATCAGTTTCAATTGTGATTTGCAATAAGGCATTGATGAGTTCATTGCATTTCATTTTTGCTACAACTTTGACAAGCTGGCATCTCCTTGTCACATTTTGTTCTCTTCATGTGGCACTAAAAATGAGATTTTTTGAGCACAAACCTTTTGATCATAAAGCTGTGATGGGGTTCGGAATTCTAAACGGAATCTCAATTGGTCTTCTAAACTTGAGCCTGGGCTTCAATTCTGTAGGCTTCTATCAGATGACTAAGCTGGCAATCATTCCATGTACTATTCTGCTGGAGATCCTATTTCTTGGGAAAAAATTCAGTAAAAGAATACAGTTTTCCCTTGGTATCCTCCTTGTTGGTGTTGGGATCGCAACAGTTACTGATTTGCAGCTCAATGCTTTGGGCTCTTTCTTATCTTTACTAGCAGTGATTACAACATGCATTGCTCAGATTGTATCCTTACTATCAGCTCAAACTTTTATTACTACGCCCTTTCAGATGACAAATACCATCCAAAAGAAGTTTAAGGTTTCTTCTACCCAGCTTCTGTATCAATCATGTCCATATCAAGCAGCAACCTTGTTAATCTCAGGACCATATCTGGATAAAGTTCTGACCGATCTAAATGTCTTTGCTTTCAAGTATACAACACAAGTGACGGCTGTCATTGTTCTTTCATGTCTTATCTCTATATCTGTAAATTTTAGTACATTTCTCGTAATCGGGAAGACATCTCCAGTCACCTATCAGGTTCTTGGACATCTGAAGACATGTTTTGTATTAGCTTTCGGTTATATTATTGTACGTGACCCATTTAGCTGGAGGAACATACTAGGCATTTTGGTTGCCATGGTTGGGATGCTTCTATATTCTTACTATTGCACACTAGAGACTCAGCAAAAAACAGCTGAAGCAACAACACAAGCATCACAGGCAAGAGAAAGTGAATCTGATCCTCTCATTAATGTAGAAAGTGGAGGAGGTACACTATTGAACAAAAGGCCCCCTGTATGGAACAAAGAGAAAGACTAA 1086 0.3895 MGEGEKFQLGTVGALSLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFDHKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLEILFLGKKFSKRIQFSLGILLVGVGIATVTDLQLNALGSFLSLLAVITTCIAQIVSLLSAQTFITTPFQMTNTIQKKFKVSSTQLLYQSCPYQAATLLISGPYLDKVLTDLNVFAFKYTTQVTAVIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCFVLAFGYIIVRDPFSWRNILGILVAMVGMLLYSYYCTLETQQKTAEATTQASQARESESDPLINVESGGGTLLNKRPPVWNKEKD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0588 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 309 - -
Lal4g0588 361 MobiDBLite consensus disorder prediction 323 361 - -
Lal4g0588 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 144 - -
Lal4g0588 361 Pfam Triose-phosphate Transporter family 21 309 IPR004853 -
Lal4g0588 361 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 2 339 - -
Lal4g0588 361 PANTHER SOLUTE CARRIER FAMILY 35 2 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0588 Lal-Chr4 4265907 4270191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0588 1 340 Organic Solute Cotransporters AT1G21870 25.284 2.96e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0588 K15285 - gmx:100786535 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0631 21 4763586 4767904 Lal4g0588 4 4265907 4270191 LSH