Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0548 ATGGGTGCATCAAATTTTATTATAGCAACTATTAATCTCTTCATTCTGTTTTTCTCATCATCTGTGTTAAACTCAGAGGATCATCATAAATTTGATAACATCTATGCAAAAGAGATTCTAAGTGCAGCCCAAAAGGAGAAAGATTGGTTGATATCAGTAAGAAGGGAAATTCATGAACACCCAGAATTGGCTTTTGAAGAACACAATACTAGTGCTCTTCTTCGCATGGAGCTTAACAACCTTGGCATAACTTATACATACCCAGTTGCCAAAACTGGTATAGTTGCTCAAATTGGCTCTGGTTCTCGTCCTATTGTTGTTCTTCGTGCTGATATGGATGCTCTTCCCTTGCAGGAGCTTGTTGAGTGGGAACACAAGAGCAAAATTGATGGCAGAATGCATGGATGTGGGCATGATGCTCACACGACAATGCTACTTGGCGCTGCAAAGTTACTGAACCAACGGAAAGATAAACTGAAGGGAACCGTGAGACTTATTTTCCAACCCGCTGAGGAGGGAGCTAGAGGTGCCTCTGAAGTGATAAAAGACGGAGCTCTAAAAGATGCTGAAGCAATTTTCGGTGTTCACATTGATCATACAACACCAACTGGAGCAATAGCATCCAGTCCGGGGCCTATATCTGCTGCCGGGTGTGTCTTTGAAGTAAAAATTGTTGGAGTAGGTGGTCATGCAGCATTACCCCACAAAAATGTGGACCCAATGTTGGCTACATCATTTGCAATACTGGCACTGCAACAACTTGTCTCAAGGGAAGCTGATCCTCTTCATAGTCAAGTTGTATCAATTACCTTCGTCAAAGGTGGAACAGCACTAAACGTGATCCCGTCTTATGTTGAATTTGGAGGCACTCTGAGGAGCCTAACAACTGATGGCCTGTACCATTTGAGAAAGCGACTAAAAGAGGTTATTGAAGGACAGGCAACTGTGCACAGATGTAATGCATATATTGATTTCAAAGAAAAATATTACACCCCATATCCTGCTGTTGTCAATGACAAAGACTTACATCTACATGTGGAAAGAGTTGGACAACTTCTGCTTGGTCGGGACAATGTCCGTGCAGCCGAGAAGGTGATGGCGGGTGAAGACTTTGCGTTTTATCAAGAAATGATTCCTGGAGCATATTATAGCATTGGAATCAGAAATGAGAAAGTGGGTTCAGTTCATTCCCCACATTCCCCTTTCTTCTTCTTAGATGAGGATGTTCTTCCAATAGGGGCAGCAATGCACACTGCAGTGGCAGAGTTGTATTTAAATGAACACATTGTTTAG 1293 0.4238 MGASNFIIATINLFILFFSSSVLNSEDHHKFDNIYAKEILSAAQKEKDWLISVRREIHEHPELAFEEHNTSALLRMELNNLGITYTYPVAKTGIVAQIGSGSRPIVVLRADMDALPLQELVEWEHKSKIDGRMHGCGHDAHTTMLLGAAKLLNQRKDKLKGTVRLIFQPAEEGARGASEVIKDGALKDAEAIFGVHIDHTTPTGAIASSPGPISAAGCVFEVKIVGVGGHAALPHKNVDPMLATSFAILALQQLVSREADPLHSQVVSITFVKGGTALNVIPSYVEFGGTLRSLTTDGLYHLRKRLKEVIEGQATVHRCNAYIDFKEKYYTPYPAVVNDKDLHLHVERVGQLLLGRDNVRAAEKVMAGEDFAFYQEMIPGAYYSIGIRNEKVGSVHSPHSPFFFLDEDVLPIGAAMHTAVAELYLNEHIV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0548 430 PIRSF Amidohydrol_AmhX 35 428 IPR017439 GO:0016787
Lal4g0548 430 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 334 IPR036264 -
Lal4g0548 430 Gene3D Zn peptidases 50 410 - -
Lal4g0548 430 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 3 13 429 - -
Lal4g0548 430 PANTHER PEPTIDASE M20 FAMILY MEMBER 13 429 IPR017439 GO:0016787
Lal4g0548 430 CDD M20_IAA_Hyd 50 425 IPR044757 GO:0009850|GO:0016787
Lal4g0548 430 Pfam Peptidase family M20/M25/M40 107 421 IPR002933 GO:0016787
Lal4g0548 430 Gene3D - 215 333 - -
Lal4g0548 430 Pfam Peptidase dimerisation domain 220 312 IPR011650 -
Lal4g0548 430 TIGRFAM amidohydrolases: amidohydrolase 50 413 IPR017439 GO:0016787
Lal4g0548 430 SUPERFAMILY Zn-dependent exopeptidases 37 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0548 Lal-Chr4 3975462 3980522 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0548 K14664 - gmx:100777587 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0548 4 3975462 3980522 Lal4g0548 4 3975462 3980522 ECH