Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0541 ATGTCTCAAATTACAATAAGATCTCCAAAACATTGTGCTGAAAAGCAAGCACTGAGAATTGAGAGGAACTACAAGAAGCTATTCTTTGTTTTCTCAGCATTTTTCACCACTCTCTTATTATTCTTACTTCTCATCTACCTCATCATCCACCCTTCAAAGCCTCAATTCTCCCTCACACAAGTTGATATCTACCAACTCAACCTCTCAGGACCAAAACTCAACTCCTCTATCCAACTCACACTTCTCTCCAAAAACCCTAACCAAAAAGTTGGCATATACTATGATGAGTTTCAAGTTTATGCAACTTACAAGGGACAACAAATAACTGGTGACACACCTGTGCTTCCCTTTTATCAAAGCCATGAAGAGAGTAATCTCTTAACAGCTTCTTTGGTTGGAAATGGTGTTCCTGTGGCTCCATCTATTGGTTATGAACTTGGTCGTGATCAAAGTGCTGGAAGACTTGTTTTGAATCTCAAGGTTAATGGAAAGCTTCGATGGAAGATTGGAACTTGGGTCTCTGGGCATTATAGGTTTATTGTTAACTGTATTTCTGTGATGGCCCTTCAACCCTCTATGACTTCAACTCCTCTCAGTTCAAAGCAGGGTTCTCAATGTTCTACCACAATTTAA 633 0.3949 MSQITIRSPKHCAEKQALRIERNYKKLFFVFSAFFTTLLLFLLLIYLIIHPSKPQFSLTQVDIYQLNLSGPKLNSSIQLTLLSKNPNQKVGIYYDEFQVYATYKGQQITGDTPVLPFYQSHEESNLLTASLVGNGVPVAPSIGYELGRDQSAGRLVLNLKVNGKLRWKIGTWVSGHYRFIVNCISVMALQPSMTSTPLSSKQGSQCSTTI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0541 210 PANTHER OS05G0367900 PROTEIN 14 210 IPR044839 GO:0098542
Lal4g0541 210 PANTHER BNAA02G10130D PROTEIN 14 210 - -
Lal4g0541 210 Pfam Late embryogenesis abundant protein 80 183 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0541 Lal-Chr4 3936724 3937356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0541 27 194 EF-hand Containing Proteins AT5G21130 25.434 8.76e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0541 - - gmx:100783857 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0621 17 4433652 4434284 Lal4g0541 4 3936724 3937356 ECH
Lal4g0541 4 3936724 3937356 Lal4g0541 4 3936724 3937356 ECH
Lal17g0621 17 4433652 4434284 Lal4g0541 4 3936724 3937356 LSH