Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0454 ATGTATACCTACTCACTTTCATTAACCCCAAGTTGTTCCCCTAAGACACATCACCACCTAAAGCCACCATCCAAATCCACCACACTCCATTCACCAACCACCATCTCGGCCGCCGCCGCCACCGCAACCATTAGAACCAAAAAGGCCCACTCAATGCCACAGGAAAAGATAGAAATTTTCAAATCACTAGAGAATTGGGCATCACACAATATCCTACCACTAGTGAAACCAATAGAGAAAAGTTGGCAACCCCATGATATGTTACCAGATTCATCTCTACCATCTGATGAGTTCATTGATCAAGTTAGAATGTTGAGAGATAGAACATCACAGCTTCCAGAAGATTATCTTGTGGTTTTGGTTGGTGCAATGATCACTGAAGAAGCATTGCCATCATACCAAACATGGATAAATCAACATGATGGGATTAAAGATGAGAGTGGTTCATGTAATAGTGCTTGGGCTAAGTGGGCTAGGAGTTGGACTTCTGAAGAGAATAGACATGGAGATTTGCTTAGAACATATCTATACCTATCTGGTAGGGTTGATATGCAAATGATTGAGAAAACTATCCATTACTTGATTTCAGCTGGCATGGATTTAAGAACAGAAAACAATCCATATATGGGTTTTGTGTACACATCGTTCCAAGAACGAGCCACTTTTATGTCACATGGCAAAATGGCTCGAATGGCTAAAGAGGGTGGTGATCCAGTGCTTGCACGCATATTGGGCACTATAGCTGCCGATGAAAAGCGCCATGAAATCGCATACATTAAGATTGTCGAGAAGCTTCTAGAAGTGGACCCCACAGAAACAATCATAGCCATTAAAAATATGATGCGTAATAAAATCACAATGCCAGCACACATGATGAAAGATGGGAGGGACCCACACCTCTATGATCATTTAGGTGCAGTGTCACAACGTCTTAGGGTATATTCCACTACTGATTATGTTAACATCGTAGAGTACTTGATCCAACGGTGGAGATTGGAGAAGTTGGAGGGTTTAACGAGCGAGGGAAGGAGTGCACAGGAATTCGTGTGTGGGCTTGTACACGTGATTAAGAGGTTGGAGGAACGTTCTAATGAGTTAGAATGCAAGAAGGAACTAAAGGGTACCAATTTCAGTTGGATCTTTAATAAAGAGGTGATGATATGA 1164 0.4192 MYTYSLSLTPSCSPKTHHHLKPPSKSTTLHSPTTISAAAATATIRTKKAHSMPQEKIEIFKSLENWASHNILPLVKPIEKSWQPHDMLPDSSLPSDEFIDQVRMLRDRTSQLPEDYLVVLVGAMITEEALPSYQTWINQHDGIKDESGSCNSAWAKWARSWTSEENRHGDLLRTYLYLSGRVDMQMIEKTIHYLISAGMDLRTENNPYMGFVYTSFQERATFMSHGKMARMAKEGGDPVLARILGTIAADEKRHEIAYIKIVEKLLEVDPTETIIAIKNMMRNKITMPAHMMKDGRDPHLYDHLGAVSQRLRVYSTTDYVNIVEYLIQRWRLEKLEGLTSEGRSAQEFVCGLVHVIKRLEERSNELECKKELKGTNFSWIFNKEVMI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0454 387 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 34 386 - -
Lal4g0454 387 Gene3D Ribonucleotide Reductase, subunit A 39 387 IPR012348 GO:0016491
Lal4g0454 387 MobiDBLite consensus disorder prediction 1 31 - -
Lal4g0454 387 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 34 386 IPR005067 GO:0006631|GO:0045300
Lal4g0454 387 SUPERFAMILY Ferritin-like 43 386 IPR009078 -
Lal4g0454 387 CDD Acyl_ACP_Desat 55 362 IPR005067 GO:0006631|GO:0045300
Lal4g0454 387 PIRSF Dlt9_acylACP_des 8 387 IPR005067 GO:0006631|GO:0045300
Lal4g0454 387 Pfam Fatty acid desaturase 55 381 IPR005067 GO:0006631|GO:0045300
Lal4g0454 387 Coils Coil 356 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0454 Lal-Chr4 3190403 3193486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0454 23 387 Acyl Lipid Metabolism Gene Families AT1G43800 63.200 2.81e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0454 K03921 - tcc:18592535 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0454 4 3190403 3193486 Lal4g0454 4 3190403 3193486 ECH