Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0440 ATGGCTAATAATGCGGCTGCATGTGCTGAGAGAGCAACTAGTGATATGCTTATTGGTCCGGACTGGGCAGTTAACATTGAATTGTGTGACATCATTAACATGGACCCTAGGCAAGCAAAAGATGCACTGAAGATACTTAAGAAGCGTTTGGGCAGTAAAAATCCACAAATACAACTTCTGACTCTTTTTGTACTGGAGACCCTTAGTAAAAATTGTGGTGAAAGTGTATATCAGCAGATCATTGAGCGGGATATCTTACATGATATGGTTAAGATAGTGAAGAAGAAGCCAGTCTTAAATGTGAGGGAAAAGATACTGATTTTAATTGACACGTGGCAAGAAGCTTTTGGGGGTCCAACTGGAGTTTATCCCCAATACTATGCAGCATATAATGAATTAAAGTCTGCTGGAGTTGTTTTTCCACCAAGAGAGGTGAATAGTGTGCCATTCTTCACTCCTCCTCAAACCCAGCAAGTTGTTCATTCCGCTGCAGAATATGATGTTGCTATTCAGGCTTCTCTTCAGTCAGATGCATCTGGCCTTAGTTTTGAAGAGATTCAAACTGCTAAAGGATTAGCTGATGTGTTGACGGAAATGCTTAGTGCCTTGAATCCCAAAGACCCTGAGGGTGTGAAGGATGAAGTAATTGTTCACCTTGTTGACCAGTGCCGTTCTTACCAAAAGTGTGTCATGGATCTTGTGAACAATACTGTGGACGAGCAGCTTTTAGGTCAGGGATTAGCATTGAATGACAACCTTCAGCGAGTACTCTGTCGACATGATGATATTGCAAAAGGAACTGCTGATGCCGGTGCAAGAGGAACAGAAACTTCAGTTCTGCCCCTTGTACATGTTAGCCATGAGGATGATGAGTCAGAAGATGATTTTGCTCAATTAGCCCATAGGTCATCACGAGATACTCATGCACAGAACCAGAAACCGGCCTATGACAAGGCAGTACCACTGAGGGTAAATCCACTTCTTCCCCCGCCACCAGCATCAAAGAAGCCAGTTTACTCTGACACTGGCATGGTTGACTATCTCAGTGGTGATACATACAAAGCAGAACCTTTTGAAAACACATTTGCAACCCCTGTTCATGCTAGCCCTAATCCTACCTCATATGCGATACCAACGGTGACCTCACCCCCTACTCATGCAGTGAGTACCCCATCACAAATTTTAAGCCGACAGTCTGTGTATGATGAACCATCTCCCGTGATAAAATCTTCAGAAGAACTGCCTCCAGCGCCCTGGGACGTGCAATCACCATCTACTGCCAGTGCCATCATTCCACCCCCATCTTCAAATCATAATCAGAGACAGCACTTTTTTGAGCAACAGGGTGGGCCTCATGTTGGTGGATCTAGTTCCTCTTATGATAGCTTGGTGGGACAAACACAGAATCTTTCTCTGAATTCATCCACCCCAACCAAACAACAGCAGCCAGCAGAAGATGCCCTTTTCAAAGATCTAGTTGATTTTGCAAAATCCAAAACTTCATCATCAAACCCCAATAGGTCATACTGA 1530 0.4392 MANNAAACAERATSDMLIGPDWAVNIELCDIINMDPRQAKDALKILKKRLGSKNPQIQLLTLFVLETLSKNCGESVYQQIIERDILHDMVKIVKKKPVLNVREKILILIDTWQEAFGGPTGVYPQYYAAYNELKSAGVVFPPREVNSVPFFTPPQTQQVVHSAAEYDVAIQASLQSDASGLSFEEIQTAKGLADVLTEMLSALNPKDPEGVKDEVIVHLVDQCRSYQKCVMDLVNNTVDEQLLGQGLALNDNLQRVLCRHDDIAKGTADAGARGTETSVLPLVHVSHEDDESEDDFAQLAHRSSRDTHAQNQKPAYDKAVPLRVNPLLPPPPASKKPVYSDTGMVDYLSGDTYKAEPFENTFATPVHASPNPTSYAIPTVTSPPTHAVSTPSQILSRQSVYDEPSPVIKSSEELPPAPWDVQSPSTASAIIPPPSSNHNQRQHFFEQQGGPHVGGSSSSYDSLVGQTQNLSLNSSTPTKQQQPAEDALFKDLVDFAKSKTSSSNPNRSY 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0440 509 SUPERFAMILY ENTH/VHS domain 8 143 IPR008942 -
Lal4g0440 509 PIRSF TOM1 1 508 IPR014645 -
Lal4g0440 509 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Lal4g0440 509 MobiDBLite consensus disorder prediction 382 489 - -
Lal4g0440 509 CDD GAT_GGA_like_plant 185 263 - -
Lal4g0440 509 MobiDBLite consensus disorder prediction 288 338 - -
Lal4g0440 509 Gene3D - 173 272 IPR038425 -
Lal4g0440 509 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Lal4g0440 509 MobiDBLite consensus disorder prediction 421 483 - -
Lal4g0440 509 Pfam VHS domain 9 134 IPR002014 GO:0035091|GO:0043130
Lal4g0440 509 Pfam GAT domain 193 266 IPR004152 GO:0035091|GO:0043130
Lal4g0440 509 CDD VHS 10 135 - -
Lal4g0440 509 PANTHER TOM1-LIKE PROTEIN 4 1 508 - -
Lal4g0440 509 SUPERFAMILY GAT-like domain 147 266 - -
Lal4g0440 509 ProSiteProfiles GAT domain profile. 177 265 IPR004152 GO:0035091|GO:0043130
Lal4g0440 509 MobiDBLite consensus disorder prediction 288 312 - -
Lal4g0440 509 PANTHER TOM1-LIKE PROTEIN 1 508 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lal4g0440 509 MobiDBLite consensus disorder prediction 382 405 - -
Lal4g0440 509 Gene3D - 2 158 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0440 Lal-Chr4 3072238 3081599 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0440 - - gmx:100792343 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0440 4 3072238 3081599 Lal4g0440 4 3072238 3081599 ECH