Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0420 ATGGGCTGCGGTGGCTCCAAGGCGGAGGAGTCCCCTTTAGTTACCCTCTGCCGGGAGCGGCGGGATTTCCTTAAAGCCGCGTCGGAGCAACGTTATGCTTTTGCTGCAGCCCACGTCTCTTACTTCCACTCCCTAAGAGATATCGGCGACGCGCTGCGTAAATTTGTCGATAACGATCTCATCATTGCCACCGCCTCCTCCTCCACTTCCTCGCCGCGACTCACATTACCCTCCGACGAAGGTAAACCGCATAAGAAGAAAAACTTCTCTTCTTCTTCCACTTCAATTTCTCACATGGTTTCACCGGAGGAGGTGGAGGAAGGAGAAGAGATCGAGGGCTCTCATTTGAACTTGTCTTCCGGGTCGGATTTTTCTGATTCGGGTCATGTTCATGTCAAAGACAGCACCGGACACGTGGCATCTCCACCTTCTTCTTCTTCTTCTCCTTCTCCTTTCGGTTATGATCATCGAGATTATGAAGATTGGAACCAACCTCAAACTTTTGCTTACTACATGAAAAGATCAGCTCCTCATGGAAAATCAATGGTGTATCAAGAGCCACAGAATCATGTAGCTTCTTCTTCACCGTATGAGTATCAGAACGGTGGTTTCTTTGGGTTTCAGATTGGTTCGTCGCCGCCGGCGACGGCGGCGGGGGATTATCGGTTTTATTCTCAGCCGGGGCCGTCGAATACAACTCCTTCACCTCCGCCGGCACCTCCTTCGCCGCCGAGAGCCTCGGCGTGGGACTTCTTTAACCTTTTTGACAGTTATGAGAACGGTTACCAGCCGGGTTATCTTAACGGGTACGGGTCGAATACGAGTAGCCCGGATTCAAAAGAGGTGAGAGAAAGGGAAGGGATTCCTGAATTGGAAGATGAGACTGAGAATGAAGTAGTGAAAGTGAAGCAACAAGTTGGTAACATTAACAACAATGAGAAGAATAAGAAGAAAATTTATATGGAAAAACATTATAAAGAGAGAGATTTTGGGGAAGGTAGTTCTAATTCTAATAAGCCAGTGCCATTATCACAAGAACAGAAACAAAGTAGTAGTGAAGGAAGTTCCAAGACAGTGAGGTTCCATAACAGTGATGATGATGACGATGACGATGTTGATGATGATTCTTCGCTTTCAGTTTCGGGTCATGAGGAAATTAAGATTAAGAGAAGTCCTGATTCTGTTATTTCGAAAAGCTCTCTTAAAGAAGAGCGAGGGCGAAAGAAAGGGGTGAGTTTTGAGGTCGATGAAGTGCCTGTAGTAACAATGGTGGATCGCGAATCGTCAAAGTCGAGTAGCATTACTACTTTGTCTGCTCACGGTACGAGGGATATCCATGAGGTTGTTCAGCAAATTAGAGATGAGTTTGAGACTGCCTCTAATTTTGGAAAAGAGGTTGCTGTTCTGCTTGAGGTTTATAAACCACCTTATCACTCCAGGCTTGCTGCATTAAAAGCAATCTTTTCCAGAATCTTGGAGATGGTAGCACCTTCCAGTCTACCTTCACATCCTCCATCTAGACCGCCTATACAATTGTCTTCTAAGGCAACGAGATTGGCCAAAGCATATTGTGGAGAACCTGGGAAAGACTTCAAGACAAACCCTGAAAACATTTCATCCACATTGGAGAAACTTTATGAATGGGAAAAGAAATTGTATAAGGAAGTTAAGGATGAAGAGAAGTTACGAGCTGTTTATGAGAAACAATGCAAGAGACTCAAAACATTGGATGACCGAGGAGCTGAATCTAGTAAAATTGATGCCACTGAGGCATCAATAAGAAAGTTGCTGACAAGAATCAACATTTGCATCAAAACTGTTGAAAGTATATCGTGGAGGATACACAAATTGAGAGATGAGGAATTGCAGCCTCAACTTGTCGAATTGATTAATGGATTGATAAGAATGTGGAAATTCATGCTCAAATGCCACCAGAAACAGTTCCAAGCAATCATGGATAGTAAAACCCACTCTCTTAGGATTAACACTGCTTTACAAAGAGATGAAGGTTTGACAGCCATCCTAGAGCTTGAAAAGGAGCTTCTGAATTGGTCCAGTCAGTTCAACAATTGGGTTAAGACTCAAAAATCATATGTTGAAAATTTGAACAAGTGGCTCATGAGGTGTCTTCTTGAAGAACATGAAGAAACAGCTGATGGTATTGCCCCTTTCTCTCCGAGTAGAGTTGGAGCTCCACCAATTTTCATAATTTGCAATGATTGGCATCAAGCAATGACTAGAATTTCAGAAAGAAGGGTGGCTGATGCCATGCATGAATTTGCACAAAAACTACATGAGCTATGGGAGAGGCAAGATCAGGAGCAACGCCAGAGAATCAAAGCAGAGTTTCTCACAAAGGACTTCGAGAAACAGCTTAGAACCTTGCGAGCAGAAATAGGAAGCACAGAACATGAGCATGATAGAGGTTCAAACAAGACTGTATTGTCGAACACTCCTTCTGATGGTGTTTCACCACTAGATGATCTAAAGGTGGATTTAGATTCAATGAAGAAGAAATTGCAAGACGAGAGGGCCAGGCATAAAGAAGCCATTAAGCTTGTTCGAGATGCAGCTTCTAATAGTTTGCAAGCAGGTTTGGTTCCCATTTTTAAGACATTAGAAAGTTTCACTTCAGAGGTGGTGAAAGCTCATGAGCAAGTTCGGCTTCAAAACAATCAAGACGCTGGAGACTCATAG 2697 0.4368 MGCGGSKAEESPLVTLCRERRDFLKAASEQRYAFAAAHVSYFHSLRDIGDALRKFVDNDLIIATASSSTSSPRLTLPSDEGKPHKKKNFSSSSTSISHMVSPEEVEEGEEIEGSHLNLSSGSDFSDSGHVHVKDSTGHVASPPSSSSSPSPFGYDHRDYEDWNQPQTFAYYMKRSAPHGKSMVYQEPQNHVASSSPYEYQNGGFFGFQIGSSPPATAAGDYRFYSQPGPSNTTPSPPPAPPSPPRASAWDFFNLFDSYENGYQPGYLNGYGSNTSSPDSKEVREREGIPELEDETENEVVKVKQQVGNINNNEKNKKKIYMEKHYKERDFGEGSSNSNKPVPLSQEQKQSSSEGSSKTVRFHNSDDDDDDDVDDDSSLSVSGHEEIKIKRSPDSVISKSSLKEERGRKKGVSFEVDEVPVVTMVDRESSKSSSITTLSAHGTRDIHEVVQQIRDEFETASNFGKEVAVLLEVYKPPYHSRLAALKAIFSRILEMVAPSSLPSHPPSRPPIQLSSKATRLAKAYCGEPGKDFKTNPENISSTLEKLYEWEKKLYKEVKDEEKLRAVYEKQCKRLKTLDDRGAESSKIDATEASIRKLLTRINICIKTVESISWRIHKLRDEELQPQLVELINGLIRMWKFMLKCHQKQFQAIMDSKTHSLRINTALQRDEGLTAILELEKELLNWSSQFNNWVKTQKSYVENLNKWLMRCLLEEHEETADGIAPFSPSRVGAPPIFIICNDWHQAMTRISERRVADAMHEFAQKLHELWERQDQEQRQRIKAEFLTKDFEKQLRTLRAEIGSTEHEHDRGSNKTVLSNTPSDGVSPLDDLKVDLDSMKKKLQDERARHKEAIKLVRDAASNSLQAGLVPIFKTLESFTSEVVKAHEQVRLQNNQDAGDS 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0420 898 Coils Coil 556 576 - -
Lal4g0420 898 Coils Coil 785 805 - -
Lal4g0420 898 MobiDBLite consensus disorder prediction 376 408 - -
Lal4g0420 898 MobiDBLite consensus disorder prediction 334 358 - -
Lal4g0420 898 MobiDBLite consensus disorder prediction 263 408 - -
Lal4g0420 898 Coils Coil 826 857 - -
Lal4g0420 898 Pfam Protein of unknown function (DUF632) 446 765 IPR006867 -
Lal4g0420 898 MobiDBLite consensus disorder prediction 67 159 - -
Lal4g0420 898 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Lal4g0420 898 PANTHER FAMILY PROTEIN, PUTATIVE (DUF630 AND DUF632)-RELATED 1 892 - -
Lal4g0420 898 PANTHER UNCHARACTERIZED 1 892 - -
Lal4g0420 898 MobiDBLite consensus disorder prediction 216 247 - -
Lal4g0420 898 MobiDBLite consensus disorder prediction 278 300 - -
Lal4g0420 898 MobiDBLite consensus disorder prediction 230 245 - -
Lal4g0420 898 MobiDBLite consensus disorder prediction 138 152 - -
Lal4g0420 898 MobiDBLite consensus disorder prediction 315 333 - -
Lal4g0420 898 Coils Coil 292 312 - -
Lal4g0420 898 MobiDBLite consensus disorder prediction 799 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0420 Lal-Chr4 2922215 2927010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0420 539 778 Acyl Lipid Metabolism Gene Families AT2G27090 36.100 1.19e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0420 - - ahf:112706051 1077.77