Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0412 ATGAATCCTTACATTATCGGTGTTGTTGTTCCTCTCATCATGCTCCTCTTACGTAACTCCAATAACCGCAAACGCCGTGGTTTACCCGTCGACGTCGGCGGCGACCCCGGCGTGGCGATCCAAAACCACCGCTTCACTTCTCCGCTGAGTTCTGCCTGGGAGGGCGTGACCACACTAGCGGAGATGTTCGAGCGTGCATGCAAGGTGCACCATGATAGGTTGTTGCTCGGGACACGCGAGCTGATCGCGAGTGAGATCGAGACGGTTAACGGAAGAAGCTTCGAGAAGGTTCATCTCGGTGAATATAAATGGCTTACGTATCGTAAAGTTTTCGAAGCTGTTACGGCTTTTGCTTCTGGTTTGGCGAATATTGGTCATGTTAGGGAAGAACGTATTGCTATATTTGCTGAAACTAGAGAAGAATGGTTTATTGCACTTCAGGGTTGCTTCAGGAGAAATGCGACCGTTGTGACTATATATGCGTCGTTGGGAGAGGAAGCTTTATGTCATTCACTGAATGAGACAGAGGTTACAACTGTGATATGTGGGTGCAAAGAATTGAGAGCACTTGCACTTATTAGTGGACAACTTGACTCAGTGAAACGTGTGATATGCATGGATGATGATATCCCATCCGAAGCCTCGTCTGTTCAGCATGGCTGGACTATCACTTCCTTCAGTAATGTGGAGAAACTTGGTCGAGAAAATCCTGTTGATGCCGATTTACCTCTTCCAGCAGATGTTGCTGTTATAATGTACACTAGTGGAAGTACAGGGCTGCCTAAGGGTGTGATGATGACACATAGAAATGTCTTGGCAACAGTCTCAGCTATAATGACAATAGTTCCTAATCTTGTTGATAAGGATGTGTATCTAGCATACTTACCAATGGCTCATATCCTTGAATTAGTAGCCGAGAATTTGATTGCGTCTGTTGGAAGCGCTATAGGATATGGATCTCCTTTGACTCTAACTGATACATCAAACAAAATAAAAAAGGGAACAAAGGGGGATGCCACTGCACTGATGCCAACTGTGATGGCAGCTGTTCCAGCAATTCTTGATCGTGTACGCGATGGAGTGTTCAAGAAGGTAAATTCAAAGGGAGGATTATCGAAGAAATTGTTTGATATAGCTTATGCACGGAGGTTGCATGCAATGAATGGTAGCTGGTTTGGTGCCTGGGGCTTGGAAAAATGCCTATGGAATTTTCTTGTGTTTAGAAAGGTCAAAGCAATTCTGGGTGGTCGTATCCGTTTTATACTGTGTGGTGGTGCTCCGCTTTCTGGTGATACCCAAAGATTCATCAATATTTGTCTTGGTGCTCCAATTGGTCAAGGATATGGTCTCACAGAGACTTGTGCTGGTGCGACATTCTCTGATTTTGATGATACATCTGTTGGCCGAGTTGGACCACCTCTTCCTTGCTCATACATTAAGCTAGTTGACTGGCCTGAAGGTGGATATTCAGTTAATGACTCGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGTCCAAATGTCACTCTTGGATACTTCAAAAATGAAGAAAAGACAAGAGAGTCTTACAAGGTTGATGAAAGAGGGATGAGGTGGTTCTATACTGGCGACATAGGGAGATTTCATACAGATGGTTGCCTTGAGATCATTGATCGAAAAAAGGACATAGTTAAGCTGCAGCATGGGGAATACGTCTCCTTGGGAAAGGTTGAGGCAGCTCTTCAAGGCAGCCACTTTGTGGACAACATCATGTTGCATGCTGATCCTTTTCACAGTTACTGTGTGGCACTCGTGGTGGTTTCTCATCAAGCATTGGAAGAGTGGGCTTCAAAACAAGGAATTGCTTATTCTGATCTTTCAGAACTATGCAGGAAAGATGAAACTGTAAAGGAGGTGCATGCATCACTTGTAAAGGAAGCAAAGAAGGCTCGGTTGGAAAAATTTGAGATTCCTGCAAAACTGAAATTACTTTCTGAGCCATGGACTCCTGAGACTGGCCTAGTCACTGCGGCTCTCAAGATCAAGAGAGATATTATCCGAAAGGCTTTCCGTGAAGAGCTCTCTAACTTGTATGCTTCATAG 2082 0.4467 MNPYIIGVVVPLIMLLLRNSNNRKRRGLPVDVGGDPGVAIQNHRFTSPLSSAWEGVTTLAEMFERACKVHHDRLLLGTRELIASEIETVNGRSFEKVHLGEYKWLTYRKVFEAVTAFASGLANIGHVREERIAIFAETREEWFIALQGCFRRNATVVTIYASLGEEALCHSLNETEVTTVICGCKELRALALISGQLDSVKRVICMDDDIPSEASSVQHGWTITSFSNVEKLGRENPVDADLPLPADVAVIMYTSGSTGLPKGVMMTHRNVLATVSAIMTIVPNLVDKDVYLAYLPMAHILELVAENLIASVGSAIGYGSPLTLTDTSNKIKKGTKGDATALMPTVMAAVPAILDRVRDGVFKKVNSKGGLSKKLFDIAYARRLHAMNGSWFGAWGLEKCLWNFLVFRKVKAILGGRIRFILCGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGATFSDFDDTSVGRVGPPLPCSYIKLVDWPEGGYSVNDSPMPRGEIVIGGPNVTLGYFKNEEKTRESYKVDERGMRWFYTGDIGRFHTDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALQGSHFVDNIMLHADPFHSYCVALVVVSHQALEEWASKQGIAYSDLSELCRKDETVKEVHASLVKEAKKARLEKFEIPAKLKLLSEPWTPETGLVTAALKIKRDIIRKAFREELSNLYAS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0412 693 Pfam AMP-binding enzyme 95 560 IPR000873 -
Lal4g0412 693 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 10 692 - -
Lal4g0412 693 Gene3D - 50 552 IPR042099 -
Lal4g0412 693 SUPERFAMILY Acetyl-CoA synthetase-like 55 691 - -
Lal4g0412 693 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 692 - -
Lal4g0412 693 ProSitePatterns Putative AMP-binding domain signature. 251 262 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0412 Lal-Chr4 2861954 2869914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0412 24 692 Acyl Lipid Metabolism Gene Families AT2G04350 64.339 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0412 K01897 - gmx:100778889 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0412 4 2861954 2869914 Lal4g0412 4 2861954 2869914 ECH