Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0333 ATGAACAACAAGTCTTCGCGCACAGATCTCTCAGTCTTCGATTTCAAGGAAGAAGATGAGATCGACGAGGAGAATCAATTCTCCAAATTCAAAAACCCTATTCAATCCCTCTCTCACCCCGATTTTCTCCCTCGTGAGGGCCAGGTTGACAATTTTGGTGTAAAGAATGTTGCAAGTACTCCTTGTGTTGATGTTAATGAAGTTGGTGGGAACTTTAATTTGGAAAAGGGTGGTTCAGAGCCCCCTCTGGACACAGCGGGAGTTATATTTCATAGCAAAGAGGAGAATCCCGAGGCGGAAGCAGCAAAACAATCGTATTCCATTAATCACGAAAATCACTGTCATATACAAATAGCTATTCATAAATACAATGAACCAGAGATGAAGGATACAAGTGGTGGTGTATCTTCACCTGAGACGAGCCAGATAGATCCTTCAGGGTCTTCATCCGATAAAGAATCAGTTGAAGCTAATTCAGAGACGGTAGAGTTCAAGTATGAGAGTGCGGGAAGAAGTTCTGCCTCCGATATTGCAGAGAATGGCATATTTAATCGTAATCCTGTTTCATTGAATGGCTGTGGATTGAATGGCATGTACAGTTTTGACATGAATGATGCAAATACAGAAGTTGTCCTTCTTCCAGATTATGTCATATACCAGGATAATTATTATATGGGGCCAAAGTTAACCTTTTCAGATTGTTGCATCAAGATCAATGTTTCAACTTCATGTATAAAGCAAGGTGCCTTAGATCTTGAATGGGCAGTTGATGATCTCATTGATATTAAGTGTCAATTGTTCCAAAGTAGTGAAACGGTCATTATGAAGCTTCATGTAATATCGAGTAATGCAAGTCAGTCAAATGGTGTAAGCTGCACTTCAGGCATTGAGGAATTGGAGATAGCAGTTGTTGATTCCGATTGGTCCCTGAGGCATAGGCAGATTACATCTCTTAATATGAAATACTTGGCTATTTGGAATATTGTGCTTAATACGGATGTTGAAGGCAATGAAAATGACTCAGGTGAATCAAGATGCTACTTCCCCAATTTTGAGGAGCCTTTTGATGAAGTTGTCTATCCAAAAGGGGATCCAGATGCTGTTTCCCTAAGTAAAAGAGATGTTGATCTCTTGCAACCAGACACTTTCATCAATGACACAATTATTGATTTTTATATCCAATATCTAAAGAGTCAGATACAAGAAGAGGAGAAGCTTAGATTTCACTTTTTCAATAGCTTTTTCTTTCGGAAGTTGGCTGATATGGACAAAAATCCATCTAGTGCTTCTGACGGCAAAGCAGCATTTCTGCGTGTTCGTAAATGGACAAGAAAAGTGAATTTATTTGACAAGGATTATATCTTCATACCTGTGAACTTCAATCTTCACTGGAGTTTAATAGTCATTTGTCATCCTGGTGAAGCGGTTAATTTTAATGATAAAGAGGTGGACAAGTCACTTAAAGTACCCTGTATTTTGCACATGGATTCTATAAAAGGAAGTCACAGCGGTCTGAAAAATCTCATGCAAAGATACTTATGGGAAGAATGGAAAGAGAGGCATAGGGATGCATTGGAAGAAGACCTTTCATCAAGATTCCTTAATATGCGTTTTCTTCCACTTGTGTTGCCCCAACAAGAAAACTCATTTGACTGTGGCCTCTTTCTGCTGCACTATTTGGAACTCTTCCTCGCTGAAGCTCCTTCTAATTTCAATCCATTCAAACTATCCAAGTTCTCCAACTTTCTCAATGTGGACTGGTTTCCGCCAGCCGAGGCTTATCTCAAGCGAACACTTATCCTGAGGTTAATCTTTGAACTGTTGGAAAACCATGGTCTGCATGAAAGCTCTTCCTCTGACTGTAGTGACGATGACCACATCTATCTAGAAAATAATCAGAACAGAACTAGCATGCAGCTTCCTGAAATCAATAAGGAGTCCAGTTCCCATTCTGGGAAGGGAATAGAAATGACTCTGTTGGCGGCGTCATCATCTTTGGATCCTCGATCTTTTAACAATGAAGGCTTGGTTCTTAAGGAGTTTTTTGCGCTAGGAGCTACAACAGATACATTACTTGGACAGTGCCAATCTTTCAATCAGCAATCATCTGATTATTGTTTCAATGGTTCAATATTTCCAATGGAGGAAGACACAGACCTCAGCGAACAATTTATGTATTTAGATGCAGATCTTAACACCCAGCAAGTAGCTGGAATTACACCTCAAACTTGTTCTTTGCCATACTTACCTAAGTACTGTGGAGGTGAGACTTTTCATACACCTGAGATTTCTCTACGAGCTGAGCATGACATGGCTGAGTCTTCACTTGATGCATCAAGTGGTGCCTCAGATGATTCAGAAGACATAGGGATCATTGAAAATTGCCCGGTTGGAAATGAAGCCCAATCGTCTAATGAAGTTGGACGAGGTGAAAAAACTTGTTCACCTAAGGAAAACCCTGAGTATTTAACATATCTTTCTGTTTCTGATGGTAACAATCTTTCAATTACCTCTCTCATGGGAATTTCTCAAGACTTGAATACAAAATCCGACGATAACAACAATGGAGATCTTCACTCTTCCTCTCAAGAGATTGCAGCTGTACAACTGGATCATGTTTCTGATGCAGTAGATGACAAGGTAACGAGTGATGGTCAGATGATTGATGACATGGCACCCGATGTGTGTGAGGAACAAGCTGCAAAGAAGAGGAGGCTTATACCCTTGGATACGGAGGTGAGCGAATCCTGA 2751 0.4028 MNNKSSRTDLSVFDFKEEDEIDEENQFSKFKNPIQSLSHPDFLPREGQVDNFGVKNVASTPCVDVNEVGGNFNLEKGGSEPPLDTAGVIFHSKEENPEAEAAKQSYSINHENHCHIQIAIHKYNEPEMKDTSGGVSSPETSQIDPSGSSSDKESVEANSETVEFKYESAGRSSASDIAENGIFNRNPVSLNGCGLNGMYSFDMNDANTEVVLLPDYVIYQDNYYMGPKLTFSDCCIKINVSTSCIKQGALDLEWAVDDLIDIKCQLFQSSETVIMKLHVISSNASQSNGVSCTSGIEELEIAVVDSDWSLRHRQITSLNMKYLAIWNIVLNTDVEGNENDSGESRCYFPNFEEPFDEVVYPKGDPDAVSLSKRDVDLLQPDTFINDTIIDFYIQYLKSQIQEEEKLRFHFFNSFFFRKLADMDKNPSSASDGKAAFLRVRKWTRKVNLFDKDYIFIPVNFNLHWSLIVICHPGEAVNFNDKEVDKSLKVPCILHMDSIKGSHSGLKNLMQRYLWEEWKERHRDALEEDLSSRFLNMRFLPLVLPQQENSFDCGLFLLHYLELFLAEAPSNFNPFKLSKFSNFLNVDWFPPAEAYLKRTLILRLIFELLENHGLHESSSSDCSDDDHIYLENNQNRTSMQLPEINKESSSHSGKGIEMTLLAASSSLDPRSFNNEGLVLKEFFALGATTDTLLGQCQSFNQQSSDYCFNGSIFPMEEDTDLSEQFMYLDADLNTQQVAGITPQTCSLPYLPKYCGGETFHTPEISLRAEHDMAESSLDASSGASDDSEDIGIIENCPVGNEAQSSNEVGRGEKTCSPKENPEYLTYLSVSDGNNLSITSLMGISQDLNTKSDDNNNGDLHSSSQEIAAVQLDHVSDAVDDKVTSDGQMIDDMAPDVCEEQAAKKRRLIPLDTEVSES 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0333 916 SUPERFAMILY Cysteine proteinases 360 607 IPR038765 -
Lal4g0333 916 Gene3D - 408 540 - -
Lal4g0333 916 Gene3D - 360 605 - -
Lal4g0333 916 MobiDBLite consensus disorder prediction 771 818 - -
Lal4g0333 916 MobiDBLite consensus disorder prediction 130 155 - -
Lal4g0333 916 MobiDBLite consensus disorder prediction 127 160 - -
Lal4g0333 916 ProSiteProfiles Ubiquitin-like protease family profile. 368 563 IPR003653 GO:0006508|GO:0008234
Lal4g0333 916 Pfam Ulp1 protease family, C-terminal catalytic domain 383 579 IPR003653 GO:0006508|GO:0008234
Lal4g0333 916 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 9 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0333 Lal-Chr4 2215844 2224585 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0333 K08596 - gmx:100800444 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0333 4 2215844 2224585 Lal4g0333 4 2215844 2224585 ECH