Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0324 ATGAACCCTCAACTACTACTACTACTACACACTTCACTCAACTTCCATCATCTTTCTTCTTCTCTCACTCTTCCCAATATGCTTACTAATCAACACTTCCAAGGGGTTTCAAATTGCTATGTGTTCAAGAGCCGGTTGCAGGAGTATGCTCAGAAGGTGGGACTTCCAACTCCTGTCTATGAAACCATGAAGGAGGGACCTTCCCATGAACCTTATTTTAGGTCGACAGTGATAGTGAATGATGTTAGGTATGATTCTTTGCCTGGGTTTTTCAACCGTAAAGCAGCAGAGCAGTCGGCCGCAGAAGTTGCTTTGGTAGAATTGGCCAAATCTAATGAAGTTAATCAATCCATCACTCAACCTGTTCATGAAACTGGATTGTGCAAGAATTTACTTCAAGAATATGCACAAAAGATGAATTACGCAATGCCTATGTATGTATGCAAAAAGGATGAAACACCTGGTCGAGCATCGATGTTTACATGCACAGTTGACATAGGGGGGATTCTCTATATCGGGGGAGCAGCAAAGACAAAGAAAGAAGCAGAAATAAAAGCCGCCAGAACTGCTTTATTAGCTATCCAGACAAGTGCATCCAATTCTTCCCAAAACCAGTCTGTCCATTCACAGTTGACAGTCATTCCAGGCAAAAAAAGGACAGGTGAATCTGCTGCCCTTGCCGGTGAGACTTCAAATACTCCAAAGCCGAAGAAATCTCGATTTATAAAGAAATCTTTGAAAAGGAAACATCGTAAAGATAAGAAGGGTCGTGGTTGTTCTGAAGGTGAGAGCGTTGGTGTGAATATCAATCATGAGGCAGAATCATTTGCAAGTGTTAAGGATGAGTCTAGTATCCAGCAAATGAAATCCGGACTATTGACTTCAGAAGAAGTGAAGAATGTTGAGAACGGAATTGCTGGTGACAAAGAGACATTGACTGGGGAGGGTTCTTTTGCTCGGAATAGCCAAGGAAATCTCGAGAATGGGAAGTCAACAGAATTGCATTCCAAAGAGATCAATATTGTGACTGTTTCTTCAGAAGCATCTTCTGTGCCTAAAGGAGACATACCGGAGATGAATGTGGAGATGAATAAAAAGCAATGTAATGGAGAAATGGTCTCTGACAAGTAA 1131 0.4164 MNPQLLLLLHTSLNFHHLSSSLTLPNMLTNQHFQGVSNCYVFKSRLQEYAQKVGLPTPVYETMKEGPSHEPYFRSTVIVNDVRYDSLPGFFNRKAAEQSAAEVALVELAKSNEVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYVCKKDETPGRASMFTCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQTSASNSSQNQSVHSQLTVIPGKKRTGESAALAGETSNTPKPKKSRFIKKSLKRKHRKDKKGRGCSEGESVGVNINHEAESFASVKDESSIQQMKSGLLTSEEVKNVENGIAGDKETLTGEGSFARNSQGNLENGKSTELHSKEINIVTVSSEASSVPKGDIPEMNVEMNKKQCNGEMVSDK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0324 376 Gene3D - 124 196 - -
Lal4g0324 376 SMART DRBM_3 42 109 IPR014720 -
Lal4g0324 376 SMART DRBM_3 128 195 IPR014720 -
Lal4g0324 376 MobiDBLite consensus disorder prediction 215 264 - -
Lal4g0324 376 CDD DSRM_AtDRB-like_rpt1 41 109 IPR044450 GO:0003725
Lal4g0324 376 MobiDBLite consensus disorder prediction 315 334 - -
Lal4g0324 376 MobiDBLite consensus disorder prediction 237 255 - -
Lal4g0324 376 Pfam Double-stranded RNA binding motif 129 192 IPR014720 -
Lal4g0324 376 Pfam Double-stranded RNA binding motif 43 105 IPR014720 -
Lal4g0324 376 PANTHER RIBONUCLEASE III 27 338 IPR011907 GO:0003723|GO:0004525|GO:0006364
Lal4g0324 376 MobiDBLite consensus disorder prediction 346 376 - -
Lal4g0324 376 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 1 27 338 IPR031147 GO:0003725
Lal4g0324 376 SUPERFAMILY dsRNA-binding domain-like 41 111 - -
Lal4g0324 376 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 41 110 IPR014720 -
Lal4g0324 376 Gene3D - 42 123 - -
Lal4g0324 376 MobiDBLite consensus disorder prediction 308 334 - -
Lal4g0324 376 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 127 196 IPR014720 -
Lal4g0324 376 SUPERFAMILY dsRNA-binding domain-like 129 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0324 Lal-Chr4 2152066 2155377 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0324 - - gmx:100782651 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0324 4 2152066 2155377 Lal4g0324 4 2152066 2155377 ECH