Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0244 ATGGATATGGAGAACGAACCGAATCACGAAACCGAAGAACAAGCTGAATTACAGGAACATGATCAACAAGAAGAAGAAGAAGAAGAATTGGTTGGGAAAGTTAACAAGCTAATGGACAAAATCACTTCCTCCATTCATAACCCTAAACCCACCGTTCTTCACGCACTTGCCTCCATTCTCGAAACTCAAGACTCTCGATACATGGAAGAGAATGATCATTTTTCCTCAAGTAATGGACGTGCTGCTCATAACATTGGCCGTCTTGGGAGTATTATCAGGGAAAATGACGAGTTCTTCGAGTTAATATCTTCTAAGTTTCTATCAGAAACAAGATACTCAACTTCGGTTCAAGTTGCTTCTACCAGACTTCTCCTCAGCTGTTCCCTATCATGGATTTATCCTCATGTTTTTGAAGAACCTGTAATAGAAAACATCAGAGATTGGGTGATGGATGATAATGCTAGTGTGTCTGCTGAAGACCAAAGTATGAAGCATCATCCAAGGAAAAGGGAGGTCTCTGATTCTGAAATGTTGAAAACATATTCTACTGGTCTCCTAGCTGTGTGTTTGATTGGTGGAGGTCAAGTAGTGGAAGATGTACTGACATCTGGTTTGCCAGCAAAGCTTATGCATTATCTACGTTTACGTGTGCTGGGAGACACAAGTAGCACTCAGAAAGATATTGGTCATTCAACAGAGGGTAGGCATGCATCTGGGAATACTTCACTGAGAAGTAGAGATGATGGTCGCAGTAGAATTCGCCATCTCCCAGAATCAAGTCATTTAGATGATACAAGGATGACTGATGAGAGATCTTTAGAAGACCAAATTCTTGAAAGGGGTCCAGATAGAAACAATGGTGAACAAAATTGCCAAGATAATTTTTGGGTAGGTGGTGAACCACCTGATGGGCTGGGTGAAGATGGTGATATCTGTGTTGTAGATGCTGATGGGGAGGATAGATGCCACAGTAGAGATACACATGATGGAAGGATAAAGTATGGTGAGCATGATGACAATGTTAATGACTCTTCAAGGCGACGTTCAAAATGGGGAAGATCCCGAGGGAAAGCAAGGGTCAACGAAAGTACTGTAGAAAGTGAACCCATTTTGTCATCTCCTGGCTCTGGCAGTCGATTAGGACAGGGACGAAGTGTTCAAGATAGGAGCATATCGAGGAATGCTGGTGCTAGGAGGGTGCCTGATTCTAAGAAGACTTGTGTGAGGGCCAATACTGAGGCTTCACTTTTGGAAAGAGACGATAATGATGACTGTTTCAAAGAATGCCAAATCGGAAGTAAAGATATTTCTGATTTTGTTCGGAAAGCTGTCCAAGCTTCTGAAGCTGAAGCTAGATCAGCCAATGCACCCGAAGAAGCTGTCAAAGCTGCAGGTGATGCTGCTGCTGACCTTGTTAAAACTGCAGCTTCAGAGGAATTTAAATCAACTAATGATGAAGAAGCAGCTGTTTTGGCCGCCTCAAGAGCTGCAGCAACTGTTATTGATGCTGCATCTGCAGTTGATGCTTCTAGGAGCTCCATCGGCATCAATTCTGAGACAGAGAATGTCAGTTCAAGAGAAACAGACTCTGGTGAGGATGTTGAAGATTATTTCATCCCAGATGCCCAATCACTTGCAATGTTGAGGGAAAAATATTGCATTCAGTGTCTTGGATTGCTCGGAGAATATGTAGAAGTTCTTGGCCCTGTGTTGCATGAGAAAGGGGTAGATGTGTGTCTTGCACTTCTGCAGCAGAATTCTAAAAACCAGGAAGCATCCAAGGTTGCCTTATTGTTGCCTGATGTCATGAAGCTGATATGTGCTTTGGCAGCTCATAGGAAATTTGCTGCCCTATTCGTAGACCGTGGGGGAATCCAAAAGCTGCTTGCTGTCCCTAGAATGATTCAAACGTTCTTTGGTCTTTCTTCTTGTCTATTTACTATTGGTTCTCTTCAGGGGATAATGGAACGGGTTTGTGCTCTTCCATCAGATGTTGTTTATCATGTGGTTGAGTTGGCTCTCCAACTCATTGAATGCAACCAAGACCAAGCCCGGAAGAATGCAGCATTGTTTTTTGCTGCTGCATTTGTCTTCAGAGCCGTTCTTGATGCTTTTGATTCCCAAGATGGATTACAGAAAGTACTAGGCCTTCTAAATGATGCTGCTTTGGTAAGATCTGGAGTAAATTCTGGAGCATTGGGCTTATCTAACACAGGGTCACTTCGAAATGATCTGTCATCTGCAGAAGTGCTGACATCATCTGAGAAGCAGGTAGCCTACCACACCTGTGTTGCTTTACGTCAATATTTCAGAGCACATCTCCTCTTATTAGTGGATTCTATTCGTCCCAACAAAAGTAATCGTAGTGCTGCTAGGAATATTCCAAGTGTGAGGGCTGTGTACAAGCCGCTTGATATTAGTAATGAGGCTATAGATGCAATATTCTTACAATTGCAAAAAGATCGGAAGCTTGGTCCTGCATTTGTGAGAACACGTTGGCCACCTGTTGAGAAGTTCTTGGCATCCAACGGGCATATTACTATGTTGGAATTGTGTCAGGCCCCACCTGTGGAGCGATATCTGCATGATTTGCTTCAGTATGCTCTGGGTGTTCTGCATGTTGTTACATTGGTACCTAGCAGTCGTAAAATGGTTGTAAATACAACATTAAGCAATAATCGTGTTGGCATAGCAGTAATTTTGGATGCAGCAAATATTGTTGGTAGTCATGTGGACCCTGAGATAATTCAGCCGGCATTAAATGTTCTAGTCAACCTTGTTTGCCCTCCACCTTCAATCAGCAATAAACCGACCCAAATCACAAATGGTCCTCCCTTGGAGAGTAGAGATAGAACTGCACAAGCCAGTCAGATTGATCCTAGGGAGAGGAATGGGGAAACCAGTGCTGTAAGTACACAAAATGTTAATAGCACTCCACAAACTCCTGGTCCCTCTGCAACTTCAGGACTGGTTGGGGACCGTAGAATATCTCTGGGTGCAGGAGCAGGTTGTGCTGGCCTTGCTGCTCAGTTGGAACAAGGATATCGCCAAGCAAGAGAGGCTGTTCGGTCTCATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCACGCATATATTCACCTCCCGCTGCTTTGGACTGTCTTCGCGCTCTGTCATGCCGAGTCTTGCTTGGATTAGCCAGAGATGATACTATTGCACAGATCTTGACGAAGCTTCAGGTTGGGAAAAAGCTATCTGAATTAATTCGGGATTCTGGTAGCCATACACTGGGAACAGAGCAGGGTAGATGGCAAGTTGAACTTTCACAGGCTGCAATTGAACTAATTGGGATTGTGACTAATTCGGGGCGTGCAAGTACATTAGCTGCTACAGATGCAGCTACTCCTACCTTAAGGCGCATAGAAAGAGCAGCAATAGCTGCTGCTACTCCTATTACATATCATGCAAGGGAACTTCTGCTTCTAGTTCATGAACATCTGCAGGCATCTGGATTGTCACAAACTGCTTCATTGTTGCTTAAGGAGGCTCAGTTGACTCCTTTGCCATCATTGATTGCTCCATCTTCTCTTGCGCAACAACCTAACACACAGGAAGCTTCCTCAATACAAATTCACTGGCCCTCTGGTCGTGCTCCTGCTGGATTTCTCACTAACAAATTTAAGGTTAATGCTAGAGATGAGGACACTAGCTTGAAAATTGATCCTGTCTCTGCAAAGAAAAAATCACTGACCTTTTCCGCTTCTTTTGGTACTCATTCGAGACATCAACTTTTTGATTCTCTGCAGTCATCAGGAAGAAAATGGCTTGGTACAGGGAAAGAATCTTCAGAAGCTAGTATAGTGGAGACTCCTGAATCTTCAGTGAAACATAGTAGTGATGCTGTATTTAAGACTCCAATGTTTCCAATGAAACGTAAGTTATCTGATGTGAAGGATATAGGAATGCTTTCATCATCTGGAAAGCGACTGAATGTTGGGGATCAAGGACTTCGTTCTCCTATTTGTTCGAGTACAATTCGTAAAAGCAGCCTGAAGACTGATGCTGTTGGGTTGTCTACACCAATTTCTAACCTAAGAAGTCAACAAAACCGTTCTACAGCTCACTATGTGGATGATAATCAATACAGTAACTCAAATCCAGGTCAGATGACACCGTCTTGCCAAGTTTTCAGTGACATTCAGCTTAACAACCCGGAGCACATAACATTAGATTCTTTAGTGGTTCAATCTCTGAAGCATCAGCATCGCCAATGCCCAGCCCCTATTACCACTCTTCCTCCACTCTCTCTTCTACACCCGCATGTTTGTCCTGAACCAAAGCAAAGCCTTGACGCCCCTTCTAATGTCACAGCTCGTCTTGGCACACGTGAATACAAGTTTATGAACGGTGGAGTACATGGGAATCACAGAGATCGCCATTTTGTTTATAGCCGGTTTAGACCATGGCGTACTTGTCGGGATGATGCTGGTGACTTATTAACATGTGTTACCTTTGTTGGGGATTCCTCTCATATTGCTGTTGGGAACCACAATGGAGAGCTCAAATTTTTTGACTCCAACAACAGCAGTGTGGTGGAGAGCTTCACAGGTCACCAGAACCCTTTAACCCTAGTTCAGTCTTTTGTTTCTGGTGACAATCAGCTATTGCTGTCTTCAAGCTCACAAGATGTTATGCTGTGGGATGCAAAATCAATTTTAATTGGCCCTACCCATTCATTTGAAGGGTGCAAGGCTGCCAGGTTTAGCAATTCTGGCAATGTTTTTGCAGCCTTGTCATTAGAATCTGCACGACGGGAAATCCTCTTGTATGATATCCACACATGTCAGTTGGAGTTGAAATTGTCAGATACACCTGAAGCTTCGACAGGGAGGAGTCATGTTTATTCTTTAATTCACTTTAGCCCTTCTGACTCAATGCTGCTTTGGAATGGTGTCTTATGGGACCGACGGGTTTCTGGGCCTGTTCATCGCTTTGAACAGTTAACGGACTATGGGGGTGGAGGTTTTCATCCTGCTGGCAATGAGGTTATTATAAACTCTGAAGTCTGGGATTTGCGGAAGTTCAGACTGCAACGTAGTGTACCTTCATTAGATCAAACTTCAATAACATTCAATGCACGTGGTGATGTAATGTATGCAATCTTAAGGAGAAATCTTGAGGATGTGATGTCAGCAGTTCACAACACACGTCGTGGCAAGCATCCTCTCTTTGCAGCTTTCCGCACATTGGATGCAATCAACTATTCAGACATTGCTACTATCCCCGTGGATCGCTGTGTTCTTGATTTTGCTTCTGAGCCAACAGATTCATTTGTTGGGTTGGTTACTATGGATGACCAAGATGAGATGTATGCATCAGCAAGAATCTATGAAATTGGTCGCCGGAGGCCAACTGATGATGATTCTGATCCTGATGATGTGGAAAGTGAGGAAGATGAAGATGATGATGAGGATGATGATGATATTGACATAGATCCTCTCTTAGGCCCTGGTTTCAGTGGGGACAGTGAGAGTGACGCTGATGACATGAGTAATGATGAAGATGAAGACAATATAAGTGACATTGGTGAAGATGGAGATTTCAATTTGGATGATGTAGACTTTGATGGAGGAAATGACATGTTGGAGATTGTAACAGAAGGTGATGAGGATGAAGATGATGATAGTGAAGGATATGAATCTTTAAGTAGTGATGAAGAGGATTACATGAATAATGGTAGTCACTTTGGTTATTGA 5739 0.4332 MDMENEPNHETEEQAELQEHDQQEEEEEELVGKVNKLMDKITSSIHNPKPTVLHALASILETQDSRYMEENDHFSSSNGRAAHNIGRLGSIIRENDEFFELISSKFLSETRYSTSVQVASTRLLLSCSLSWIYPHVFEEPVIENIRDWVMDDNASVSAEDQSMKHHPRKREVSDSEMLKTYSTGLLAVCLIGGGQVVEDVLTSGLPAKLMHYLRLRVLGDTSSTQKDIGHSTEGRHASGNTSLRSRDDGRSRIRHLPESSHLDDTRMTDERSLEDQILERGPDRNNGEQNCQDNFWVGGEPPDGLGEDGDICVVDADGEDRCHSRDTHDGRIKYGEHDDNVNDSSRRRSKWGRSRGKARVNESTVESEPILSSPGSGSRLGQGRSVQDRSISRNAGARRVPDSKKTCVRANTEASLLERDDNDDCFKECQIGSKDISDFVRKAVQASEAEARSANAPEEAVKAAGDAAADLVKTAASEEFKSTNDEEAAVLAASRAAATVIDAASAVDASRSSIGINSETENVSSRETDSGEDVEDYFIPDAQSLAMLREKYCIQCLGLLGEYVEVLGPVLHEKGVDVCLALLQQNSKNQEASKVALLLPDVMKLICALAAHRKFAALFVDRGGIQKLLAVPRMIQTFFGLSSCLFTIGSLQGIMERVCALPSDVVYHVVELALQLIECNQDQARKNAALFFAAAFVFRAVLDAFDSQDGLQKVLGLLNDAALVRSGVNSGALGLSNTGSLRNDLSSAEVLTSSEKQVAYHTCVALRQYFRAHLLLLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAIDAIFLQLQKDRKLGPAFVRTRWPPVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHVVTLVPSSRKMVVNTTLSNNRVGIAVILDAANIVGSHVDPEIIQPALNVLVNLVCPPPSISNKPTQITNGPPLESRDRTAQASQIDPRERNGETSAVSTQNVNSTPQTPGPSATSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRSHNGIKVLLHLLQPRIYSPPAALDCLRALSCRVLLGLARDDTIAQILTKLQVGKKLSELIRDSGSHTLGTEQGRWQVELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHARELLLLVHEHLQASGLSQTASLLLKEAQLTPLPSLIAPSSLAQQPNTQEASSIQIHWPSGRAPAGFLTNKFKVNARDEDTSLKIDPVSAKKKSLTFSASFGTHSRHQLFDSLQSSGRKWLGTGKESSEASIVETPESSVKHSSDAVFKTPMFPMKRKLSDVKDIGMLSSSGKRLNVGDQGLRSPICSSTIRKSSLKTDAVGLSTPISNLRSQQNRSTAHYVDDNQYSNSNPGQMTPSCQVFSDIQLNNPEHITLDSLVVQSLKHQHRQCPAPITTLPPLSLLHPHVCPEPKQSLDAPSNVTARLGTREYKFMNGGVHGNHRDRHFVYSRFRPWRTCRDDAGDLLTCVTFVGDSSHIAVGNHNGELKFFDSNNSSVVESFTGHQNPLTLVQSFVSGDNQLLLSSSSQDVMLWDAKSILIGPTHSFEGCKAARFSNSGNVFAALSLESARREILLYDIHTCQLELKLSDTPEASTGRSHVYSLIHFSPSDSMLLWNGVLWDRRVSGPVHRFEQLTDYGGGGFHPAGNEVIINSEVWDLRKFRLQRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHNTRRGKHPLFAAFRTLDAINYSDIATIPVDRCVLDFASEPTDSFVGLVTMDDQDEMYASARIYEIGRRRPTDDDSDPDDVESEEDEDDDEDDDDIDIDPLLGPGFSGDSESDADDMSNDEDEDNISDIGEDGDFNLDDVDFDGGNDMLEIVTEGDEDEDDDSEGYESLSSDEEDYMNNGSHFGY 1912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0244 1912 MobiDBLite consensus disorder prediction 1 30 - -
Lal4g0244 1912 ProSiteProfiles LIS1 homology (LisH) motif profile. 1149 1181 IPR006594 GO:0005515
Lal4g0244 1912 SUPERFAMILY ARM repeat 553 1088 IPR016024 -
Lal4g0244 1912 SUPERFAMILY WD40 repeat-like 1491 1714 IPR036322 GO:0005515
Lal4g0244 1912 MobiDBLite consensus disorder prediction 223 405 - -
Lal4g0244 1912 MobiDBLite consensus disorder prediction 315 362 - -
Lal4g0244 1912 Coils Coil 8 40 - -
Lal4g0244 1912 Gene3D - 1480 1805 IPR015943 GO:0005515
Lal4g0244 1912 PANTHER BNAA03G51310D PROTEIN 1243 1791 - -
Lal4g0244 1912 PANTHER BNAA03G51310D PROTEIN 326 1255 - -
Lal4g0244 1912 PANTHER BNAA03G51310D PROTEIN 13 261 - -
Lal4g0244 1912 MobiDBLite consensus disorder prediction 1 16 - -
Lal4g0244 1912 MobiDBLite consensus disorder prediction 1804 1826 - -
Lal4g0244 1912 MobiDBLite consensus disorder prediction 240 282 - -
Lal4g0244 1912 SMART Lish 1149 1181 IPR006594 GO:0005515
Lal4g0244 1912 MobiDBLite consensus disorder prediction 1840 1898 - -
Lal4g0244 1912 MobiDBLite consensus disorder prediction 223 239 - -
Lal4g0244 1912 MobiDBLite consensus disorder prediction 933 992 - -
Lal4g0244 1912 MobiDBLite consensus disorder prediction 933 987 - -
Lal4g0244 1912 SMART WD40_4 1522 1562 IPR001680 GO:0005515
Lal4g0244 1912 SMART WD40_4 1479 1519 IPR001680 GO:0005515
Lal4g0244 1912 SMART WD40_4 1567 1605 IPR001680 GO:0005515
Lal4g0244 1912 MobiDBLite consensus disorder prediction 1791 1912 - -
Lal4g0244 1912 PANTHER VPRBP PROTEIN-RELATED 326 1255 IPR033270 GO:0016567
Lal4g0244 1912 PANTHER VPRBP PROTEIN-RELATED 1243 1791 IPR033270 GO:0016567
Lal4g0244 1912 PANTHER VPRBP PROTEIN-RELATED 13 261 IPR033270 GO:0016567
Lal4g0244 1912 MobiDBLite consensus disorder prediction 365 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0244 Lal-Chr4 1571237 1582498 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0244 K11789 - gmx:100796030 2702.16