Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0219 ATGTTTAGACTTCTTTTAATTCAAGCTGATAGCTTAATATATTTATACTTGGGGTTAATCATTCTTGTGGTTGGACCTGCTTTGCAACAGAACAGAGGTTGCATTGGATGCTTCACAAAACCTCGTGTAGTATCTAAGGGACTCAGACCTGAAGGCGAAGCAGTGAAGAAAGACAACAGATCAGAAGATTTATGGTGCAGCAGCACTTCTGAAATGGACCGTTATGCAGCTGAATCCCAGAGAAGCATCTCATCAATTGGCATATCAAGCCACCCTTCTGATCCTCGAAGTAGTGCTGGCATTCAGACTGATCCTCCTGAATTTATCAATGAAGGTCTTCTTCTCTGGAACCAGATAAGACAACAGTGGGTTGGACATAGAAAACCTGAGAGTCAGAAACAAGCTGGAGAACCTAGAATAAGTTGGAATGCCACCTACGAGACTCTAGTTGGGACTAACAGGCGTTTTCCTCAGCCCATTCCTCTGGCAGAAATGGTTGATTTTCTTGTTGATATTTGGGAGATAGAGGGTCTGTATGACTGA 543 0.4291 MFRLLLIQADSLIYLYLGLIILVVGPALQQNRGCIGCFTKPRVVSKGLRPEGEAVKKDNRSEDLWCSSTSEMDRYAAESQRSISSIGISSHPSDPRSSAGIQTDPPEFINEGLLLWNQIRQQWVGHRKPESQKQAGEPRISWNATYETLVGTNRRFPQPIPLAEMVDFLVDIWEIEGLYD 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0219 180 MobiDBLite consensus disorder prediction 82 103 - -
Lal4g0219 180 Pfam Protein of unknown function (DUF4050) 70 135 IPR025124 -
Lal4g0219 180 Pfam Protein of unknown function (DUF4050) 139 180 IPR025124 -
Lal4g0219 180 PANTHER DUF4050 FAMILY PROTEIN 27 180 - -
Lal4g0219 180 PANTHER OS07G0479600 PROTEIN 27 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0219 Lal-Chr4 1377608 1381197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0219 - - zju:107409467 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0219 4 1377608 1381197 Lal4g0219 4 1377608 1381197 ECH
Lal21g0337 21 2254262 2257820 Lal4g0219 4 1377608 1381197 ECH
Lal7g1261 7 18099281 18101943 Lal4g0219 4 1377608 1381197 ECH
Lal19g1381 19 16624731 16629499 Lal4g0219 4 1377608 1381197 ECH
Lal4g1291 4 16967852 16971486 Lal4g0219 4 1377608 1381197 ECH
Lal21g1059 21 12686649 12689275 Lal4g0219 4 1377608 1381197 ECH