Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0211 ATGGGATTCATTAGCGGCATGATCATTGGTCTCCTTATTGGCATTGGACTAATCATCGCTTTTGCTCGTTATGGAAACATCCGATCCAAGCGTCGTTCCGATTTGGCAAAGACAATCGCAGCGTTTGCAAGGATGACAGTGGAAGATTCTAGAAAACTTCTACCTCCTAAGTTCTATCCCTCATGGGTAGTTTTCACTCGTAGACAGAAGTTAACTTGGTTTAATAGCCAACTTGAGAAGATTTGGCCATATGTTAATGAGGCAGCCTCAGATTTGATAAGAAGCAATGTGGAACCTATTCTTGAACAATACAAGCCTATTATTTTGTCTTCTCTCACTTTCTCCAAATTGACACTTGGCACTGTGGCTCCGCAATTTACAGGAATTTCAATAGTTGAAGAAGATAGTGGGTCTAATGGAGTGACGATGGAGCTTGAGATGCAATGGGATGGAAACCCGAATATCGTTCTTGACATTAAAACAAGAGTTGGTGTTGTACTTCCTGTGCAGGTCAAAAATATTGGATTCACTGGGGTTTTCAGGTTGATCTTTAAACCACTAGTAGATGAATTCCCTGGTTTTGGAGCTGTTTCTTTTTCCTTGAGAGAAAAGAGAGATCTAGATTTTACTCTCAAGGTTATTGGTGGCGATCTATCATCATTACCTGGAGTATCTGATGCTATAGAGGAAACAATTCGAGACGCTATTGAAGACTCAATAACTTGGCCAGTACGAAAAGTTATACCAATTTTACCAGGGGACTACAGTAACCTGGAATTGAAACCTGTTGGGACACTTGATGTAAAACTAGTGCAAGCAAAGGACTTGGCAAATAAAGATCTAATTGGGAAATCAGATCCTTTTGCTGTCTTATTTGTACGCCCGCTTCGTGACAGAACGAAAACCAGTAAAACAATTAATAACCAGTTGAATCCAGTATGGAATGAGCATTTTGAGTTCACTATTGAAGATTCATCTACACAACACTTAACCATAAGAATTTTCGATGATGAAGGCATTCAGGCTGCTCAGCTTATTGGATGTGCCCAAGTGCCTCTAAAGGACCTTGAACCTGGTAAAGTCAAGGTTGTATGGTTGAAACTGGTTAAGGATTTGGAGGTCCATAGAGATAACAAATACCGGGGTGAGGTGCACTTGGAGCTCTTGTACTGTCCTATTGGAGATGATAAAAACAGCTTTAAGAACCCTTTTGACCCTGATTTCTCATTAACAACATTCGAAAAGACCCTAAAGAGTGGAACTGAGGCAGAGGCAGGGAAACTTTCAAGATCATCATCATCATCAAGGAAGAAAAGCAATGTGATAGTGAGAGGGGTTCTATCTGTCACAGTGATTTCAGCTGAAGACTTACCTGTAGTGGACTTAATGGGCAAGGCTGACCCATATGTAGTCCTTAATTTGAAAAAATCAGAGAAAAAACTCAAGACTAGGGTTGTAAATGAATCCCTAAACCCAGTATGGAATCAAACATTTGACATTGTTGTGGAGGATGGCTTACATGAAATGTTAATTCTTGAAGTCTGGGATCACGATACATTTGGCAAGGAAAAAATTGGAAGAGTGATATTGACACTGACAAAGGTGATATTGGAAGGAGAATATCAAGAAACTTATCCACTAGAAGGAGCTAAATCTGGAAAAATTGATTTGTATCTTAAGTGGACTCCTCAGCACAAGTTCAGAGATCCATAA 1713 0.3981 MGFISGMIIGLLIGIGLIIAFARYGNIRSKRRSDLAKTIAAFARMTVEDSRKLLPPKFYPSWVVFTRRQKLTWFNSQLEKIWPYVNEAASDLIRSNVEPILEQYKPIILSSLTFSKLTLGTVAPQFTGISIVEEDSGSNGVTMELEMQWDGNPNIVLDIKTRVGVVLPVQVKNIGFTGVFRLIFKPLVDEFPGFGAVSFSLREKRDLDFTLKVIGGDLSSLPGVSDAIEETIRDAIEDSITWPVRKVIPILPGDYSNLELKPVGTLDVKLVQAKDLANKDLIGKSDPFAVLFVRPLRDRTKTSKTINNQLNPVWNEHFEFTIEDSSTQHLTIRIFDDEGIQAAQLIGCAQVPLKDLEPGKVKVVWLKLVKDLEVHRDNKYRGEVHLELLYCPIGDDKNSFKNPFDPDFSLTTFEKTLKSGTEAEAGKLSRSSSSSRKKSNVIVRGVLSVTVISAEDLPVVDLMGKADPYVVLNLKKSEKKLKTRVVNESLNPVWNQTFDIVVEDGLHEMLILEVWDHDTFGKEKIGRVILTLTKVILEGEYQETYPLEGAKSGKIDLYLKWTPQHKFRDP 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0211 570 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 441 564 IPR035892 -
Lal4g0211 570 ProSiteProfiles C2 domain profile. 424 545 IPR000008 -
Lal4g0211 570 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 394 IPR035892 -
Lal4g0211 570 Gene3D C2 domain 260 404 IPR035892 -
Lal4g0211 570 CDD C2 266 368 - -
Lal4g0211 570 PANTHER SYNAPTOTAGMIN-4 1 569 - -
Lal4g0211 570 PRINTS C2 domain signature 462 474 IPR000008 -
Lal4g0211 570 PRINTS C2 domain signature 488 501 IPR000008 -
Lal4g0211 570 PRINTS C2 domain signature 510 518 IPR000008 -
Lal4g0211 570 SMART C2_3c 446 544 IPR000008 -
Lal4g0211 570 SMART C2_3c 265 365 IPR000008 -
Lal4g0211 570 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 70 250 IPR039010 -
Lal4g0211 570 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 67 251 IPR031468 GO:0008289
Lal4g0211 570 CDD C2 447 547 - -
Lal4g0211 570 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 569 IPR045050 GO:0008289
Lal4g0211 570 Pfam C2 domain 264 368 IPR000008 -
Lal4g0211 570 Pfam C2 domain 445 547 IPR000008 -
Lal4g0211 570 Gene3D C2 domain 428 563 IPR035892 -
Lal4g0211 570 ProSiteProfiles C2 domain profile. 245 366 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0211 Lal-Chr4 1311229 1315898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0211 400 535 Lipid Metabolism Gene Families AT1G51570 29.412 5.13e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0211 - - gmx:100787972 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0211 4 1311229 1315898 Lal4g0211 4 1311229 1315898 ECH