Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0208 ATGTCTTCATTTTCCACTCTAAGGAAATCCTTACACTTATTCCACCGTTTCAATTCACAATCTTGTGTAACATTTTCATCCCACACAGGTTCCGTTTTCAGGTTTTCTCCGAAGTGGGTTTCAGCTATTGTGGTGGGCTCCACTATTGGTCTTCTTTATTGCTTCTCTACTAAACCCAATTCTACTGGTACTCACAATTATGCAGATCCATTCTTCTCTAAATTATCCCTTCCTAAATCTACTAACAAATCGCTTTTAAGCGATGGATACAGGAGAAGGGTTTTCTTCAACTATGAGAAGCGCATGCGGTTACATAGTCCTCCTGAGAAGGTATTTGAATACTTTGCATCTTGTCATAGTCCAGAAGGAGAACTACTGATGAGGCCCGCAGACCTGATGCGAGCAATTATTCCTGTTTTCCCTCCATCTGAGTCCGACATTGTTAAAGGTGGATACTTGCAAGGTGAAAGAAGTCCTAGTCACTTACATTGTCCCCCTTCCCAAATTTTCATGCTTTTTGATGTCAACACCGACGACCTTATATCTTTCAAGGAGGAGATAGATAAGGAAGAGTTCAAGAAGGTGATGGCATTGATGCGATCTCATAACAGACAAGGCGTTAAGCACAGGAATGGACTACGAACTGGCCTAAAGGTCGATGGTTCTGTAGAAAATGGAGGGCTGGTGGAATACTTTTTTGGTAAAGATGGAAAAGGATGCCTCAGCCATGATAAATTCATAAAATTTATGAGAGACTTGCATGATGAAGTTCTGAGGCTGGAGTTTGCTCATTATGATTACAAGTCTCGAAACACCATCTCGGCGAAGGACTTTGCATTTTCCATGGTTGCTTCTGCCGACATGAGCCATTTGGGAAGGCTGCTTGAGCGGGTTGACGAATTGGACAATGATCCACACTTCAGGGATGTACGCATCACATTCGAGGAGTTCAAAAATTTTGCCGAGCTGCGGAAGAAATTGTTACCATTTTCATTTGCCCTTTTCAGTTTTGCAAAAGTAAACAACACATTATCAAAGGATGATTTTCAGCGAGCTGCATCACATGTTTGTGATTTATCTCTGTCTAACAATGTTGTTGAGATCGTTTTCCATTTGTTTGACACAAATGGGGATGGAAATCTAAGTTCAGATGAGTTTGTGAGAGTACTACACAAGAGAGAGAAGGACATTGCTCAACCTGTGAGGACAGGAATCCTTGGTTTATTGTCTTGCCGCTGGGAATTACACTGA 1251 0.4165 MSSFSTLRKSLHLFHRFNSQSCVTFSSHTGSVFRFSPKWVSAIVVGSTIGLLYCFSTKPNSTGTHNYADPFFSKLSLPKSTNKSLLSDGYRRRVFFNYEKRMRLHSPPEKVFEYFASCHSPEGELLMRPADLMRAIIPVFPPSESDIVKGGYLQGERSPSHLHCPPSQIFMLFDVNTDDLISFKEEIDKEEFKKVMALMRSHNRQGVKHRNGLRTGLKVDGSVENGGLVEYFFGKDGKGCLSHDKFIKFMRDLHDEVLRLEFAHYDYKSRNTISAKDFAFSMVASADMSHLGRLLERVDELDNDPHFRDVRITFEEFKNFAELRKKLLPFSFALFSFAKVNNTLSKDDFQRAASHVCDLSLSNNVVEIVFHLFDTNGDGNLSSDEFVRVLHKREKDIAQPVRTGILGLLSCRWELH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0208 416 CDD EFh_MICU 170 393 - -
Lal4g0208 416 Gene3D - 166 282 - -
Lal4g0208 416 SUPERFAMILY EF-hand 168 288 IPR011992 -
Lal4g0208 416 Gene3D - 285 401 - -
Lal4g0208 416 ProSiteProfiles EF-hand calcium-binding domain profile. 361 396 IPR002048 GO:0005509
Lal4g0208 416 PANTHER CALCIUM-BINDING EF HAND PROTEIN 186 414 - -
Lal4g0208 416 PANTHER CALCIUM-BINDING EF HAND PROTEIN 1 187 - -
Lal4g0208 416 ProSitePatterns EF-hand calcium-binding domain. 374 386 IPR018247 -
Lal4g0208 416 Pfam EF-hand domain pair 344 391 IPR002048 GO:0005509
Lal4g0208 416 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 1 187 IPR039800 GO:0005509|GO:0006851
Lal4g0208 416 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 186 414 IPR039800 GO:0005509|GO:0006851
Lal4g0208 416 SUPERFAMILY EF-hand 259 392 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0208 Lal-Chr4 1299427 1303960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0208 38 355 EF-hand Containing Proteins AT4G32060 54.987 1.44e-135 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0208 K22827 - gmx:100786375 545.814