Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0199 ATGCTTCTGGGTTTTAGATCGGAGAATCCCAACCTTCTTTTCCTTCTCTACAAGAATCACTTCTCTCTCTCAAAATCACCTTATATACTTCGTTTTGTTTCAGATCTAGTTGATTTCATTAAGAATCTTTGTTTACGAGCTCTGTTCGCTGAAAAATCATCTTCAGGTTTGTTGATTCACCTCTGTTCGTGGTTTATTTTATCTGTTAGTTTGCAGATCTGGGGGTTTGGTTGCAAGTTTGATTCTGTTCTTTGGATTTGTTGTTTAGAAATGTCAATTATATCGAAAGGGGATTCGGTTCAAATCAGGGAGGTTTGGAACTATAATTTGGAAGAGGAATTTGCGTTGATCCGCGAAATAGTCGATGATTATAACCATGTTGCTATGGATACGGAGTTCCCTGGGGTTGTTCTTCGCCCTTTGGCGCAGTTCAAATATATCAATGACTATAATTATCAAACTTTGAAGGACAACGTTGACATGTTGAAGCTGATCCAGTTAGGTCTTACCTTCTCTGATGAGAATGGAAACCTTCCAACTTGTGGCTCTGAAAATCCTTGCATTTGGCAGTTCAATTTCCGCGAATTCAACATCAGCGAGGACATTTTTGCAAGTGATTCAATTGAGTTGTTGCGCCAGTGCGGGATTGATTTCAAGAAGAACAGCGAGGAGGGGATTGACGTGAACCGATTTGGCGAGCTTCTCATGTCATCTGGGATTGTGTTGAACGCTGGTGTTAATTGGGTGACATTCCACAGTGGTTATGATTTTGGTTACCTGCTTAAGCTTTTGACTTGCCGAACCTTGCCCGATACACAGACTGGATTCTTTGACTTGATCAAGATTTATTTCCCTGTGTTGTATGATATCAAGCATTTGATGAAGTTTTGCAACAACCTTCATGGTGGTTTGAACAAGCTTGCGGAGTTGTTGGAAGTGGAGAGAATTGGTGTCTGCCATCAAGCTGGATCAGATAGTTTACTCACTTCAAGTACATTCAGAAAGTTGAGGGATACTTTCTTCAATGGCTCTGTGGAGAAATATTCTGGTGTTTTGTATGGTTTAGGTGTTGAGAATGGACAGGACTAA 1089 0.405 MLLGFRSENPNLLFLLYKNHFSLSKSPYILRFVSDLVDFIKNLCLRALFAEKSSSGLLIHLCSWFILSVSLQIWGFGCKFDSVLWICCLEMSIISKGDSVQIREVWNYNLEEEFALIREIVDDYNHVAMDTEFPGVVLRPLAQFKYINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGSENPCIWQFNFREFNISEDIFASDSIELLRQCGIDFKKNSEEGIDVNRFGELLMSSGIVLNAGVNWVTFHSGYDFGYLLKLLTCRTLPDTQTGFFDLIKIYFPVLYDIKHLMKFCNNLHGGLNKLAELLEVERIGVCHQAGSDSLLTSSTFRKLRDTFFNGSVEKYSGVLYGLGVENGQD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0199 362 Gene3D - 88 359 IPR036397 GO:0003676
Lal4g0199 362 SUPERFAMILY Ribonuclease H-like 96 357 IPR012337 -
Lal4g0199 362 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 91 361 IPR039637 GO:0004535|GO:0030014
Lal4g0199 362 Pfam CAF1 family ribonuclease 105 226 IPR006941 -
Lal4g0199 362 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED 91 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0199 Lal-Chr4 1245412 1247126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0199 K12581 - gmx:100785970 507.679