LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal4g0195	ATGATGAGTAACCAAGTTACTCCAACTTCAACCAATGACCGATCATCAACAAGGATGTGTTGGATTCCATCAATGGAACGTTATTTCATTGATCTTATGTTAGAGCATTTGCATAAAGGTAACAGAGTTGGTCACACTTTCAATAAGCAAGCTTGGACAGACATGCTTACAATGTTCAATGCTAAATTTGGTTCTCAATATGACAAAGATGTATTGAAAAATCGTTATACAAATTTGTGGAAGCAATTCAATGATGTTAAGAACCTTCTTTCACACTCTGGTTTTTCTTGGGATGCTTCCCGCCAAATGGTGGTAGCTGAGGATGTTGATTGGGATTGTTATTTGAAGACTCACCCTGATGCAAAATGTTATAGAACTAAACCATTGCTTAATTTTGATGATTTGTGTGTTATATATGGCCACACTGTTGCTGATGGAAGATATAGTTTATCAAGTCATGATGTTTGCATTGATGATGAAGTGAATGTATTAAATTTGGGTGATGGAATGGGAGGCATTGCTGTATCAAATAATGAGCGTCCGAAGACAGATTGGAGTGTTGCAATGGACCAATATTTTATAGAGCTTTTGCTTGATCAGTTGAGCAAGGGCAATAGAGTCAATAATTCATTCAATAAAAAAGCTTGGACAGATATGCTTGCTATGTTTAATGCTAAATTTGGCACTCGACATTCGAAAAGGATTTTGAAGAATCGGTTCAGGAAACTTTTGAAATATTACCGTGATATAAAAGTATTTCTAAAGCAAGGCATTTCATGGAATGAACAAGAACAAAAGCTTTCAGCGGATGATGATGTATGGGATGCTTATGTCAAGGCACATCCACATGCACGAGCATATAGATTGAAAACTTTGCCAAACTATCGCGATCTAGAGTTAATATTCAAGGATGTGTCTGATGATGAGACCAGTAGTTTGTATCAGGAGCAAAATCTCAAAGATGTCACATCAGAGATAAAGGCTGGTGAAGGAAAAGGACGTCGCAACCCAAGTGGCACTGATCGTACTAGAACATATTGGACACCCCCAATGGATCGTTTCCTCATTGACTTATTATTGGAGCATGTAAATAGTGGAAATAAACTAGGGCAGACATTCTTCACCCAGGCTTGGAAAGACATGGTTACATCTTTCAATGAGCAATTCAAATCTGAATATGACAAAGATGTTCTGAAAAACCGTTACAAGCATTTGAGGAAACAGTTCAGTGATGTAAACAATCTTCTTCAGCAGACTGGGTTCTCATGGGATGATACAAGAGAAATGATTACTGCAAAGGACCATGTTTGGGATGCTTACATAAAGGCACACCCTGAAGTACGACCACTCAGAGTTAAAACTTTGCCAGGCTATCACAAATTGTGTGTCATATTTGGAGAGGAACCTTCTGATACAAGATATATTCGTTTATCACATAAAGCACAACCCATTAGTGAATCGCCACTGTTGATGATGAATGAACTAAAGAATGACACTTTTCCCAATGTTTATGATGATGCATCTACAATGGAGTGGACGGAATCAATGCAAAGCTGTTTTGTTGCCCTTATGATTGAGCAAGTAAATAGAGGAAATAGGAATGGCTATTTATTCAGTGAACAAGCTTGGACTGACATGACCCAATCATTTAGTGCTAAATTGGGACTCCAATTTGATAAGCAGTTTCTACTAGATCAATATTTCCGCTTGATGAAACAACATGATGACATCACCACTCTTCTCAGTCATACTGGATTTGCATGGGATGAAACCCTCCAAGTGATACTTGCTGAGAATGATACCTGGGACGCATACATTAAGGATCACCCAGATGTCTTCTCATATAAAAACAGGTTTTTGCATTTTTACCAGGATTTGTGCAAGGTTTTTGGAAACAAAGTATCAGATATAAGAGTGAGTGATCTGGAGCACATTCAATTGATGGACATGAAAGATATTACCTTCGAAATGGATGGAACATGTGGAGATTTTGTTGTGCTTAATAATGCTGATACATCAACCCCGGACGTGGACAATTCGAGGGGAATGGACATGGATGGATCATCTGGAACTTTGGTTCTGAATGGCAACACTGAAATATCATACCAAGATAAAGATAGTCCAACTGAAATTCTTAGGGTTGGTTCATCTGGAAATTTTGATGTGACTAGTAACAATGAAGTATCAAACCAGGATACAGAAAGGCCAAGGGAAATGGATGAAGATGGAACAACTGGTGATTTGGTTGTGACTGGCAATGCTCAAATACTATCCCGAGATAAAAAAAGGCTAAACCAAATGAACATGAGTGGAACATGTGGAAATTTGGTAGCGGACGCCGTTAAGAGAAGGCCAAATACAACGCCGTTAGACTCCAGTCCTCCTAAGAAGAACGCTAGAATGAAAGAGGCTTTGTCTGAGATGGCAAGTGCTGTCAAAGCACTGGTGAATAAGAAAGAGAAAAACAATACATTACTTGAAAATGCTTTAACTGCACTTCAATCATTGCCGGACATAGATGATGAGCTAGTAATGGATGCATGTGATCTGTTGGAGGATGAGAGAAAGGCAAAGATATTTTTAGCTTTGGATATCTCTTTGCGAAAGAAGTGGTTACTTAGAAAGCTTCGTCAGTAA	2637	0.3841	MMSNQVTPTSTNDRSSTRMCWIPSMERYFIDLMLEHLHKGNRVGHTFNKQAWTDMLTMFNAKFGSQYDKDVLKNRYTNLWKQFNDVKNLLSHSGFSWDASRQMVVAEDVDWDCYLKTHPDAKCYRTKPLLNFDDLCVIYGHTVADGRYSLSSHDVCIDDEVNVLNLGDGMGGIAVSNNERPKTDWSVAMDQYFIELLLDQLSKGNRVNNSFNKKAWTDMLAMFNAKFGTRHSKRILKNRFRKLLKYYRDIKVFLKQGISWNEQEQKLSADDDVWDAYVKAHPHARAYRLKTLPNYRDLELIFKDVSDDETSSLYQEQNLKDVTSEIKAGEGKGRRNPSGTDRTRTYWTPPMDRFLIDLLLEHVNSGNKLGQTFFTQAWKDMVTSFNEQFKSEYDKDVLKNRYKHLRKQFSDVNNLLQQTGFSWDDTREMITAKDHVWDAYIKAHPEVRPLRVKTLPGYHKLCVIFGEEPSDTRYIRLSHKAQPISESPLLMMNELKNDTFPNVYDDASTMEWTESMQSCFVALMIEQVNRGNRNGYLFSEQAWTDMTQSFSAKLGLQFDKQFLLDQYFRLMKQHDDITTLLSHTGFAWDETLQVILAENDTWDAYIKDHPDVFSYKNRFLHFYQDLCKVFGNKVSDIRVSDLEHIQLMDMKDITFEMDGTCGDFVVLNNADTSTPDVDNSRGMDMDGSSGTLVLNGNTEISYQDKDSPTEILRVGSSGNFDVTSNNEVSNQDTERPREMDEDGTTGDLVVTGNAQILSRDKKRLNQMNMSGTCGNLVADAVKRRPNTTPLDSSPPKKNARMKEALSEMASAVKALVNKKEKNNTLLENALTALQSLPDIDDELVMDACDLLEDERKAKIFLALDISLRKKWLLRKLRQ	878

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal4g0195	878	MobiDBLite	consensus disorder prediction	713	746	-	-
	Lal4g0195	878	MobiDBLite	consensus disorder prediction	713	730	-	-
	Lal4g0195	878	PANTHER	EXPRESSED PROTEIN	327	485	-	-
	Lal4g0195	878	PANTHER	EXPRESSED PROTEIN	764	878	-	-
	Lal4g0195	878	PANTHER	EXPRESSED PROTEIN	9	167	-	-
	Lal4g0195	878	PANTHER	EXPRESSED PROTEIN	175	312	-	-
	Lal4g0195	878	PANTHER	EXPRESSED PROTEIN	504	650	-	-
	Lal4g0195	878	MobiDBLite	consensus disorder prediction	324	343	-	-
	Lal4g0195	878	Coils	Coil	801	836	-	-
	Lal4g0195	878	Pfam	Myb/SANT-like DNA-binding domain	21	114	IPR024752	-
	Lal4g0195	878	Pfam	Myb/SANT-like DNA-binding domain	185	277	IPR024752	-
	Lal4g0195	878	Pfam	Myb/SANT-like DNA-binding domain	511	605	IPR024752	-
	Lal4g0195	878	Pfam	Myb/SANT-like DNA-binding domain	346	440	IPR024752	-
	Lal4g0195	878	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	764	878	-	-
	Lal4g0195	878	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	175	312	-	-
	Lal4g0195	878	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	327	485	-	-
	Lal4g0195	878	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	9	167	-	-
	Lal4g0195	878	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	504	650	-	-
	Lal4g0195	878	MobiDBLite	consensus disorder prediction	324	339	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal4g0195	Lal-Chr4	1217126	1221962	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal4g0195	-		-	aprc:113865140	1214.91

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal4g0195	4	1217126	1221962	Lal4g0195	4	1217126	1221962	ECH