Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0185 ATGAACTTATCCAAGAAAGGACCTCATACCGATGCAAAACTAAGCATTCCAAACAAGGCAACCACTTTGAATCCAAATGCAGCAGAGTTTATTCCCTTTTCACTCCGATCATCACTGTCTAGAACTACAAGCTCCATTGACTCAACAGCCAGGGGAGCTCTTGGGAAAGCTGTTGTAGATCGAACAGAATCATCCATTTCAAATAATTCTGATGATGAAGTGCACCAATACTGGCGATGTCAGCTCCCTGATGATATAACCCCTGATTTCAAGTTCACGGGAGAAGAGGATTCCCAGGGTCTGAACGACCTCTCTTTAGCACACTTATCCATACGTGGCGACAATGAAGCCTCTGTGTTTCCTTCTTCTAAAGGAAGTAGATATATATTAAATGAGCATGATGAATTATCTCAACAGCTCATTAACGACAATAATTTTGCAGATAAATTACGGTTTTCCAATTCAAGCTACAGGGAGGACCTGTCTTCAACAAACTTCCTTAGCACTTCAGCAAAGCCATGGGATATGCCAATTGGGAGTACCAATCACCATGCTAGCAGTGGTCAAGATGGGCTTATTTATGATGACTACTCTGAACAGGGATTCTTCAATGACATTTTGGTTGAGAATTCAGTTGTAGATGATACTGGTTTGAACCCCTTGGAGATTTTAGCTTCTCTATTCCCTGGTTTTGCAGCAGAAAGCATAATAGAAGTTTACTATGCCAATGGATGTGATTTACATCTGACAACTGAGATACTCAATCAGTTAGAGAATACTACATCTGATGGGATGGATGCTAAGTATTTAGAACAATACCTGTGGCTTGTTTTGGCAGGGAAGAGCAATCTCCCCATAAAGTTCCGAAGTGATTCAGGTGCAACACAGCTTCCAGTTTCTAATCCAAGTTGCCTGCTTCAAGTTGACGGTAATTTCAACCAGAATCTGAATTCCAAGACTTTGTCAGCTCCCGATCTCAGTGCAATGGACTTTCCTGCACTTACTTCACCAGATGGCCAGACTGCTTCTGTAAGATTTGCTGTAGATAGTGTTCAACAAAGTGGCAATCCTTACCGATCACCTGACAAAGACAGGCTCTTTTCCAAATCTAGCTCTGCAGTTCCATCTAGAGGTGCTGCTGACTTTGCTTCACCTGTTAAGAAGCTGGCTACTCAGGATTCTGGTATTTGGAAGTATGATAAAAATGGTTATGGTGATGTTGCTATTGGCTCAAGTAGGAGTTCTCATGTTCTGGCCAGTGGCTACTATGGTGGACATGGGAGAGCTGACTTTGGTGATAGGTTACAGAGCCGTGGCTCAGCTCTGGCAGCTCCTGTTTGGCTTGAAACCGGTGACACTGTTGCAAATATGTATTCGGAGATGCGGGAGGAGGCTAGTGATCATGCACGCTTACGTAATGCATATTTTGAGCAGGCGCAGCAAGCTTATATTATTGGCAATAAGGCTCTAGCAAAGGATCTAAGTGTTAAAGGGCAACTGCACAACATGCATATGAAAGCAGCTCACGGAAAAGCTGAAGAATCTATTTACCACAAGAGAAACCCAGTTGCTCCAGATATGCAGGGAAATGAAAGGGGACACGAGAGGATGATAGATCTACAAGGATTACATGCAAATGAAGCGATTCATGTGCTTAAACATGAATTGAGTGTGCTGAGAAGCACTGCCAGAGCTACAGAGCAATTTTTACAAGTTTATATTTGTGTTGGCACCGGTCAACATACAAGGGGCGCTCGCATTCCTGCTAGACTTCCAATAGCTGTACAGCGATTTCTACTCGAAGAGGGCCATGACTTCACAGAACCTCAGCCAGGCCTACTTCGTATTGTGATATATTGA 1860 0.4317 MNLSKKGPHTDAKLSIPNKATTLNPNAAEFIPFSLRSSLSRTTSSIDSTARGALGKAVVDRTESSISNNSDDEVHQYWRCQLPDDITPDFKFTGEEDSQGLNDLSLAHLSIRGDNEASVFPSSKGSRYILNEHDELSQQLINDNNFADKLRFSNSSYREDLSSTNFLSTSAKPWDMPIGSTNHHASSGQDGLIYDDYSEQGFFNDILVENSVVDDTGLNPLEILASLFPGFAAESIIEVYYANGCDLHLTTEILNQLENTTSDGMDAKYLEQYLWLVLAGKSNLPIKFRSDSGATQLPVSNPSCLLQVDGNFNQNLNSKTLSAPDLSAMDFPALTSPDGQTASVRFAVDSVQQSGNPYRSPDKDRLFSKSSSAVPSRGAADFASPVKKLATQDSGIWKYDKNGYGDVAIGSSRSSHVLASGYYGGHGRADFGDRLQSRGSALAAPVWLETGDTVANMYSEMREEASDHARLRNAYFEQAQQAYIIGNKALAKDLSVKGQLHNMHMKAAHGKAEESIYHKRNPVAPDMQGNERGHERMIDLQGLHANEAIHVLKHELSVLRSTARATEQFLQVYICVGTGQHTRGARIPARLPIAVQRFLLEEGHDFTEPQPGLLRIVIY 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0185 619 MobiDBLite consensus disorder prediction 350 370 - -
Lal4g0185 619 Pfam Domain of unknown function (DUF1771) 458 521 IPR013899 -
Lal4g0185 619 Gene3D - 505 618 IPR036063 -
Lal4g0185 619 SMART SMR_2 535 619 IPR002625 -
Lal4g0185 619 SUPERFAMILY SMR domain-like 536 617 IPR036063 -
Lal4g0185 619 CDD CUE_CID7_like 218 260 IPR041806 -
Lal4g0185 619 ProSiteProfiles Smr domain profile. 538 619 IPR002625 -
Lal4g0185 619 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 619 - -
Lal4g0185 619 SMART DUF1771_2 457 522 IPR013899 -
Lal4g0185 619 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0185 Lal-Chr4 1156147 1160486 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0185 - - vun:114164614 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0185 4 1156147 1160486 Lal4g0185 4 1156147 1160486 ECH