Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0180 ATGGGTGAGTTCTTCTACGTCAACAACTTTTCAATGTCTGGCCATGAAACTGCCATTGATAAGAACCATGATGTTTGCTGGTACGAGGAAGTTATCGATGATGATCTCAAATGGTCTTTTGCTCTTAACAGCGTGCTTCACAAAGGGATCAGTGATTACCAAGAGATTGCTCTCATTGATACAAAGCGTTTTGGAAAGGCCTTAGTGATTGATGGGAAGATGCAGAGTGCTGAAATAGATGAATTCATTTATCATGAATGCTTGATTCATCCCTCTCTTTTATGTCACCCCAACCCAAAAACAGTGTTTATAATGGGAGGAGGGGAAGGGTCTGCTGCTAGGGAAGTCCTCAAGCACAGGTCACTGGAGAAAGTGGTCATGTGTGACATAGATCAGGAGGTGGTGGATTTCTGCAGAAAATATTTGACTGAAAATAAGGAGGCCTTCTCAAATAAGAAGCTTAACCTTGTCATCAATGATGCCAAGGCTGAATTAGAGAAGAGAAATGAAAGGTTTGATATCATTGTTGGAGATTTGGCTGACCCAGTTGAAGGTGGGCCTTGCTATCAACTCTATACAAAATCATTCTATGAGAATATCCTGAAGCCCAAGCTTAATGCTGATGGCATTTTTGTGACACAGGGTGGACCAGCAGGTATATTGACACACAAGGAGGTTTTCACTTCAATATACAACACAATCAAACAGGTTTTTAAATATGTAGTGGCATACACAACTCATGTACCATCTTTTGCTGACACATGGGGATGGGTTATGGCTTCAGACCAACCACTATTCATTGGTGCTGAGGAAATGGACAAAAGAATTGAAGCAAGAATAAATGGAGAATTGCTCTACCTAGATGGTAACTGGTTTCATTCATCTACCACAATGAATAAGACTCTTTCTCAATCGTTGTTGAATGAAACTGTGATATATACAGAAGAAAATGCTAGATTCATTCCTGGACATGGCGTCGCTTATCATTTCAAAACATAG 999 0.4024 MGEFFYVNNFSMSGHETAIDKNHDVCWYEEVIDDDLKWSFALNSVLHKGISDYQEIALIDTKRFGKALVIDGKMQSAEIDEFIYHECLIHPSLLCHPNPKTVFIMGGGEGSAAREVLKHRSLEKVVMCDIDQEVVDFCRKYLTENKEAFSNKKLNLVINDAKAELEKRNERFDIIVGDLADPVEGGPCYQLYTKSFYENILKPKLNADGIFVTQGGPAGILTHKEVFTSIYNTIKQVFKYVVAYTTHVPSFADTWGWVMASDQPLFIGAEEMDKRIEARINGELLYLDGNWFHSSTTMNKTLSQSLLNETVIYTEENARFIPGHGVAYHFKT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0180 332 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 25 262 IPR030374 -
Lal4g0180 332 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 13 329 - -
Lal4g0180 332 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 302 IPR029063 -
Lal4g0180 332 CDD AdoMet_MTases 106 214 - -
Lal4g0180 332 PANTHER BNAA02G04280D PROTEIN 13 329 - -
Lal4g0180 332 Gene3D Vaccinia Virus protein VP39 78 329 IPR029063 -
Lal4g0180 332 Hamap Polyamine aminopropyltransferase [speE]. 26 308 IPR001045 GO:0003824
Lal4g0180 332 Coils Coil 151 171 - -
Lal4g0180 332 Pfam Spermine/spermidine synthase domain 81 259 - -
Lal4g0180 332 Pfam Spermidine synthase tetramerisation domain 27 78 IPR035246 -
Lal4g0180 332 Gene3D Spermidine synthase, tetramerisation domain 26 77 IPR037163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0180 Lal-Chr4 1127480 1130624 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0180 K18787 - gmx:100784972 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0180 4 1127480 1130624 Lal4g0180 4 1127480 1130624 ECH