Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0179 ATGAGTTTACACGCATCAATATCTTCACTCTTTACCAATTCCAAGTCATTGATTCTCCACCACCACCACCATCACCACAGCCACACCTTCACTCATTCTAATTTTAAGCCTTTTTTCTTCTTCCCATTTCTCTCTCGCACCAATCAAATTCACTCTTCCCCAATCATGGCTCTCTCCAACTCAGACACTGCTCGGGCCCCACCACCTTTCAAGATCGGGCTCTGTCAACTCTCAGTGACCCCTGATAAGGACAGGAACATCGCCCACGCCCGCAACGCCATACAGGAAGCCGCCACTAAGGGTGCTAAGCTTGTTCTCTTGCCGGAAATTTGGAATAGTCCTTATTCAAATGATAGTTTTCCAATCTATGCCGAGGATATTGATGCTGGTGGTGATGCTTCTCCGTCCACTGCTATGCTCTCTCAATTGTCTCATAATTTGAAGATCACTATAGTTGGTGGTTCTATTCCTGAACGTTCTGAAGGACGGTTATACAACACTTGCTGTGTCTTCGGCACCGATGGAAAGATCAAAGCCAAGCACCGCAAGATACACCTCTTTGATATTGACATCCCTGGGAAGATTACCTTTATTGAATCAAAAACTCTTTCTGCTGGGGAGACTCCAACAATCGTGGACACAGAGGTTGGGCGCATTGGTATAGGCATCTGTTATGACATTCGCTTTCCAGAACTAGCAATGATTTATGCTGCAAGAGGTGCTCACTTGCTCTGCTACCCTGGGGCATTTAACATGACAACTGGGCCATTGCATTGGGAGTTATTGCAGAGGGCAAGGGCCACAGATAATCAGTTATATGTGGCAACCTGCTCACCTGCTCGGGATGCTGGATCTGGTTATGTGGCGTGGGGCCACTCCACTCTAGTTGGACCATTTGGAGAAATTCTGGCTACTACAGAACATGAGGAAGCAATCATCGTAGCAGAAATTGATTATTCAATATTAGAGCAGAGAAGGACAAATCTCCCTGTGACTAAGCAAAGAAGAGGTGATCTTTACCAATTGGTGGATTTTCAAAGGCTGAATTCCCACTGA 1056 0.4593 MSLHASISSLFTNSKSLILHHHHHHHSHTFTHSNFKPFFFFPFLSRTNQIHSSPIMALSNSDTARAPPPFKIGLCQLSVTPDKDRNIAHARNAIQEAATKGAKLVLLPEIWNSPYSNDSFPIYAEDIDAGGDASPSTAMLSQLSHNLKITIVGGSIPERSEGRLYNTCCVFGTDGKIKAKHRKIHLFDIDIPGKITFIESKTLSAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDAGSGYVAWGHSTLVGPFGEILATTEHEEAIIVAEIDYSILEQRRTNLPVTKQRRGDLYQLVDFQRLNSH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0179 351 Gene3D - 69 345 IPR036526 -
Lal4g0179 351 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 70 319 IPR003010 GO:0006807
Lal4g0179 351 SUPERFAMILY Carbon-nitrogen hydrolase 68 343 IPR036526 -
Lal4g0179 351 ProSitePatterns Uncharacterized protein family UPF0012 signature. 220 240 IPR001110 -
Lal4g0179 351 Pfam Carbon-nitrogen hydrolase 72 322 IPR003010 GO:0006807
Lal4g0179 351 PANTHER OMEGA-AMIDASE, CHLOROPLASTIC-LIKE 66 350 - -
Lal4g0179 351 CDD nit 71 336 IPR045254 GO:0016811
Lal4g0179 351 PANTHER NITRILASE-RELATED 66 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0179 Lal-Chr4 1123107 1127031 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0179 K13566 - gmx:100817195 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0179 4 1123107 1127031 Lal4g0179 4 1123107 1127031 ECH