Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0174 ATGGGGCGAATCCATGTCCAGAAGAAGAAAGCAAAAGCAAAAGCAAATGCAAATGCAAATGAAAATGAAGAAAAGAAGGGAACGAAAACGAAGATGAGTGGAAGTGAAAGATCAGCGTATTTCGCTCGTAGAGAATCAGCAAAGATATTGAAAGTTGTTCTTGAAGGAGATGCTAAGCGACGTGCTCTTGCTTCAATCAAATCCTTAATCTATAAGCCTTCTGTTAGAAACAAAAAAGCTACTTTTGCTATCATTTGTCAAACCCTTAAACATCTTCCTATTATCAAACATGTCTTGGATTCTTCTTCTTTACTCAACTCCAAGTGGAAGAGACAAGAAGAATTGATTTACATCATTGTCTATGATATTCTTTTCGGTCAGGCAGTTTCACTGGTTGGGGATGCAGAAAAGTACCTCGTGCGCCACAAAGAGGCTCTCCACTCATCTCTTAAACAGCTTATGATACAGAGAAAAGTCAAGAATGTTAAGGAATTAGTTGCTCTGCATCAAGTTCCAGATGTTTCACTACCTCGTTATGTTCGTGTGAATACACTTAAACTTGATGTTGATTCTGCCTTACTTCAACTTCGGGAAAATTACTCGGTTCAAAAGGATGATTTACTGCCTGACTTGCTGATACTTCCACCAGGCACTGATTTGCATGACCACCCTCTTGTCAAAAACGGAAGTATCTTTATGCAAGGTAAGGCGAGTTCCATGGTAGCACCGGCCCTTAGCCCTGAACCAGGATGGGAGGTTCTCGATGCTTGTGCGGCACCAGGAAACAAGACTGTCCACCTTGCCGCCCTTATGAAGAGAAAGGGTAGGATCATAGCATGTGAGCTGCGGAAAGAAAGGGTTAAACGTTTGAAAGACACTATCAAGCTATCCGGTGCTTCTAACATACAAGCTCTCAATGAGGATTTCTTGAACATAGATCCCAAGGCTCCTTCATATTCTAAGATTCAGGCTATTCTTTTGGATCCTTCCTGCTCCGGCTCTGGTACTGCTGCTACAAGACTAGACCATCTGCTCCCATCTAAAGCTGAAGATCAGGATACTGACACGGAAAGACTGAACAAGCTTTCAGCTTTTCAGAGAAAGGCTCTCCAGCATGCTTTACTTTTTCCTGCAGCTGAAAGAATTGTCTACAGCACATGTTCAATCCACCAAATTGAGAATGAAGATGTCATCCAATCTGTTCTGCCCTTAGCCGAATCACATGGATTCAAACTGGTGGATCCCTTCCCGGAGTGGCAATGTCGTGGTCTTCCGGTATTTGAAGGCTCTGAAAATTTGGTTCGGACAGATCCTGCGAAGCACGGGGAGGGTTTCTTCATTGCTTTGTTTGCCAGGAAAGATGAAACTACAACTCCCCATAGCTCTACCAGAACCAGAAACCTGCAAAAGAAGAAAACCATTGTGCCATTTATTCGCCCTAACTTGTTCAATATGTGGTTATATGGTCAACTGAACCGGCATGGTTGCATGCACAAGTGCTGTAGTGGTCGGAATAGAAGGGATACCACAACTGACTAA 1539 0.4301 MGRIHVQKKKAKAKANANANENEEKKGTKTKMSGSERSAYFARRESAKILKVVLEGDAKRRALASIKSLIYKPSVRNKKATFAIICQTLKHLPIIKHVLDSSSLLNSKWKRQEELIYIIVYDILFGQAVSLVGDAEKYLVRHKEALHSSLKQLMIQRKVKNVKELVALHQVPDVSLPRYVRVNTLKLDVDSALLQLRENYSVQKDDLLPDLLILPPGTDLHDHPLVKNGSIFMQGKASSMVAPALSPEPGWEVLDACAAPGNKTVHLAALMKRKGRIIACELRKERVKRLKDTIKLSGASNIQALNEDFLNIDPKAPSYSKIQAILLDPSCSGSGTAATRLDHLLPSKAEDQDTDTERLNKLSAFQRKALQHALLFPAAERIVYSTCSIHQIENEDVIQSVLPLAESHGFKLVDPFPEWQCRGLPVFEGSENLVRTDPAKHGEGFFIALFARKDETTTPHSSTRTRNLQKKKTIVPFIRPNLFNMWLYGQLNRHGCMHKCCSGRNRRDTTTD 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0174 512 MobiDBLite consensus disorder prediction 1 35 - -
Lal4g0174 512 Gene3D Vaccinia Virus protein VP39 234 459 IPR029063 -
Lal4g0174 512 PANTHER BNAA09G04380D PROTEIN 15 468 - -
Lal4g0174 512 Gene3D Sun protein; domain 3 169 233 - -
Lal4g0174 512 Pfam 16S rRNA methyltransferase RsmB/F 244 450 IPR001678 GO:0008168
Lal4g0174 512 MobiDBLite consensus disorder prediction 14 32 - -
Lal4g0174 512 PRINTS RNA (C5-cytosine) methyltransferase signature 225 239 IPR023267 GO:0001510
Lal4g0174 512 PRINTS RNA (C5-cytosine) methyltransferase signature 254 264 IPR023267 GO:0001510
Lal4g0174 512 PRINTS RNA (C5-cytosine) methyltransferase signature 323 335 IPR023267 GO:0001510
Lal4g0174 512 PRINTS RNA (C5-cytosine) methyltransferase signature 379 395 IPR023267 GO:0001510
Lal4g0174 512 PRINTS RNA (C5-cytosine) methyltransferase signature 435 452 IPR023267 GO:0001510
Lal4g0174 512 CDD AdoMet_MTases 253 334 - -
Lal4g0174 512 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 168 453 IPR001678 GO:0008168
Lal4g0174 512 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 15 468 IPR023267 GO:0001510
Lal4g0174 512 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 176 452 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0174 K15264 - gmx:100811850 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0174 4 1101315 1105612 Lal4g0174 4 1101315 1105612 ECH