Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0147 ATGCAAACGTGGAAGCAGATCAGAGACAGGGAAGATGGGAAATTACCGTCACGCACTTTCGCAAATCGCATAAAATCAAATCGTATCTCTAACCTTCAATTATCCAATCACAAAGATATCGTTTCTTCTCATAAAGGTTCAATCAATTCACTTCAGATTGATTATAGTGAAGGAAGATATTTATTATCCGCTGCATCCGATTCTACCGTTGCTGTTTATGATATTCAACGTCCCACCAATTATGAAGGATGTGGTGTTATATCTAAACACACTTCTATATTTGTTGTTGATAAACAACATGAATCGGGTCATAAATATGCAGTGTCTTCTGCTATATGGTATCCTATTGATACTGGTTTATTCATTACTGCTTCATATGATCATCACATTAATGTGTGGGATACTAATACAACCAAGGTTGTAGTGAATTTCAAAATGCCTGGTAAGGTGTATAAGACTGCAATGTCTACATTGGCAACATCACACATGCTTATTGCTGCTGGAACTGAGGATGTTCAAGTTCGACTTTGTGATATTGCTTCTGGTGCTTTTGCTCACACTTTGTCCGGTCATCGTGGAGCTAGTCCGTGCAAGTATTTGTTGCTAAATCATGCTTCTTCTCTATCTCTGCTGTTTAATGCGACATGTTTGGTATTGCATCACATGTGTTCTGTGATAGCAGATGGAGTAATGAATGTTGAATGGTCTACTTCAAGTGAGTGGGTCTTGATTACTGGGGGATGTGATGGAGCAATACGTTTTTGGGACATCAGACGAGCTGGCTGTTTCCTTCTGTTAGATCAATCACGGACCCAGCTTGGAAGACGCCCACCTATACTTAAACATTCTGCGATAACTAAGGATTCAAGTACCAAATTGCGTACTGCACATAAGAAACATGCTAATGGGGGTGGTAGCAAACAACTACCAATTGGTAGAGTTCCATCCAAGGGACCAATGAAGCAGAGATTACATCCAGGAATGCTGTCTACTCAGGACCGTGCAACTGCTCATTATGGTGCCGTGACAGGGTTAAAAGTAACAGAGAATGGCATGTATCTCCTTAGTACAGGGTCTGATTCAAGGTTGAGATTGTGGGATGTTGAATCTAGCTGTGACACACTTGTGAACTTCGAAACAGTCCGCCTGCAAACAAGCAAACCTATTCAATTAGCCACCGCTCAAGATTCAGCCCTTGTTTTTGTTCCATGCATGAGAACTGTGAAAGCATTTGACATGTGGTCTGGGAACACATACGCAACATTACGTGGTCACTATGAATGTGTGAATGCTTGCTGGTTTAATCAACAAGATCAAGAATTATATACTGGTGGAAATGATAGACAAATTCTTGTCTGGTCACCTGCTAGATTAATTGCTGATCAAATGGATGAAGGAGCCAATGAGGATCAGGATAACTGGAGTAGCTGA 1431 0.4081 MQTWKQIRDREDGKLPSRTFANRIKSNRISNLQLSNHKDIVSSHKGSINSLQIDYSEGRYLLSAASDSTVAVYDIQRPTNYEGCGVISKHTSIFVVDKQHESGHKYAVSSAIWYPIDTGLFITASYDHHINVWDTNTTKVVVNFKMPGKVYKTAMSTLATSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRGASPCKYLLLNHASSLSLLFNATCLVLHHMCSVIADGVMNVEWSTSSEWVLITGGCDGAIRFWDIRRAGCFLLLDQSRTQLGRRPPILKHSAITKDSSTKLRTAHKKHANGGGSKQLPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKVTENGMYLLSTGSDSRLRLWDVESSCDTLVNFETVRLQTSKPIQLATAQDSALVFVPCMRTVKAFDMWSGNTYATLRGHYECVNACWFNQQDQELYTGGNDRQILVWSPARLIADQMDEGANEDQDNWSS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0147 476 ProSiteProfiles Trp-Asp (WD) repeats profile. 422 454 IPR001680 GO:0005515
Lal4g0147 476 Gene3D - 215 309 IPR015943 GO:0005515
Lal4g0147 476 Gene3D - 312 457 IPR015943 GO:0005515
Lal4g0147 476 Gene3D - 4 196 IPR015943 GO:0005515
Lal4g0147 476 PANTHER DNA EXCISION REPAIR PROTEIN ERCC-8 4 193 IPR042238 GO:0006283
Lal4g0147 476 PANTHER DNA EXCISION REPAIR PROTEIN ERCC-8 221 476 IPR042238 GO:0006283
Lal4g0147 476 ProSitePatterns Trp-Asp (WD) repeats signature. 354 368 IPR019775 -
Lal4g0147 476 PRINTS G protein beta WD-40 repeat signature 121 135 IPR020472 -
Lal4g0147 476 PRINTS G protein beta WD-40 repeat signature 243 257 IPR020472 -
Lal4g0147 476 PRINTS G protein beta WD-40 repeat signature 354 368 IPR020472 -
Lal4g0147 476 ProSiteProfiles Trp-Asp (WD) repeats profile. 101 143 IPR001680 GO:0005515
Lal4g0147 476 MobiDBLite consensus disorder prediction 297 322 - -
Lal4g0147 476 SUPERFAMILY WD40 repeat-like 37 454 IPR036322 GO:0005515
Lal4g0147 476 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 422 454 - -
Lal4g0147 476 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 335 370 - -
Lal4g0147 476 SMART WD40_4 415 454 IPR001680 GO:0005515
Lal4g0147 476 SMART WD40_4 216 256 IPR001680 GO:0005515
Lal4g0147 476 SMART WD40_4 89 134 IPR001680 GO:0005515
Lal4g0147 476 SMART WD40_4 34 74 IPR001680 GO:0005515
Lal4g0147 476 SMART WD40_4 325 367 IPR001680 GO:0005515
Lal4g0147 476 ProSitePatterns Trp-Asp (WD) repeats signature. 243 257 IPR019775 -
Lal4g0147 476 Pfam WD domain, G-beta repeat 224 256 IPR001680 GO:0005515
Lal4g0147 476 Pfam WD domain, G-beta repeat 336 367 IPR001680 GO:0005515
Lal4g0147 476 Pfam WD domain, G-beta repeat 418 454 IPR001680 GO:0005515
Lal4g0147 476 Pfam WD domain, G-beta repeat 102 134 IPR001680 GO:0005515
Lal4g0147 476 ProSiteProfiles Trp-Asp (WD) repeats profile. 335 370 IPR001680 GO:0005515
Lal4g0147 476 ProSiteProfiles Trp-Asp (WD) repeats profile. 41 76 IPR001680 GO:0005515
Lal4g0147 476 ProSiteProfiles Trp-Asp (WD) repeats profile. 230 258 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0147 K10570 - gmx:100790433 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0147 4 903636 907458 Lal4g0147 4 903636 907458 ECH