Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0146 ATGTCGAATCGACATGGCCAGAGTAGGCATGAAGACAATAACAATAACAACAACAACAACAAGGGTTTCATCAAAACCCATCAGAAATTCGTTCCCAAAAACCCTAATCCAAATCATGCTCAACCCTCGAACCAAAACCCCACCCTCTCAACCTCTCTCAGAGATACACCACCATCTAAATCCAATGCTCCAATCGCCAGGGTTCAATTGGGTCATACTGGAGAGTGGGTCCCACACAGAGATTACGGTTCCAATGGCAATTTCGTAAAATACTTGCCTCAAGATGAGGCTGTTGCAACTGGTCTTGGTGCTGAGGATGGTGCATTGGATCCCCTTGAATCTCAGAGAGTTGTAGATCTTCTGAATAGAGAGTTATCTCGGTTACTAAAACTCAAACCTAAAGAATTCTGGAAACAAGTGGCTACTGATACTTCCTTACATGAGTTTCTGGACAGCTTCCTACAATTTAGGAGCAGATGGTATGACTTCCCTCATCGTGGGGTCAAAGGTATTGTCGCTGGTGTTATTGTTGGAGAGCTTGATTTAAGCCGACGTGTTTTCATGGTATTGTATCGCATTTCTTCTAATAAAGATCCCGGTGCTCGACCTGGTGATACCCTCAGTTTGAGAGACCATGAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGAATTGCCGAAGTTGCTAGACATATGTGCTATATACAATCATGAAAATGAAGAACTCACAAAATTGCTGGTCACAAATGCTTTGAATGCTCAGCCTTGGATCCATAATAATCTGACTGCAGTGATATCCCATTTTCTAGGAATTGTCAGCACAATGCATGAGCGTTGCATTTCTTCATTGGAGGTCTTATTTTCTTCTGGAAAACCTGATTACCAAAATGCTACTTTTCTTCAAGCTGATCTGCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAGTGGATGCTTTTGTTAGTGCATATGAACCAGCAACTATATTCTTCTCCTCTCCAGTTGAAATGAGTTATGGAAATGAGGAACTGCTAAGCGTTCTTGCCAGACTGCATGATTCATTAATTCCATCCTTGCAAAAGGGATTCCATATCATATTTGTTGACAGACAAGATGTGGCAGTGTCTAATATCTTTGTAAGTTTGAAGATGTTAAGAATGAGATTGGTGAAGTTTGGTTGGCAATTACTCCGATCCTGCTATCTAAGTGATGAAGTGTTCAGAGATGGCATCCCTCTACCATTTGTGACAACAATGTTTCCTGCCAATGTAGAGGACCCAGTCATCAGAGCAGAGATTCTGGTTCAAACATTTAAAAAGATCAATTCAGTATCATTGAGTTTTCAAGAAATGCATCAGAAGGATACGTTTCTTCAAGATGTTGAAAGGAATTTCAATATATTAAGCAGGCTTGAGAGATTGAAGGATGATGGATGGATGTTCATTGATGATGAACAGCTTCAATATATTTCTGGGATTTTTGGTTCTCAGAAAGAAATTTCTGAGGAGTCAATTTCTGCAATAACCCCTGTGCCAGGCAAGACATTGCAGATGGATGAAGATGCTGCCATTATAGAATCAAAAATAAGTCAAATTAGAGACCTGTTTCCTGATTATGGTAAAGGATTTTTAGCTGCGTGTCTTGAAGTCTATGACCATAATCCAGAAGAGGTTATTCAAAGAATTTTAGAGGGAACCCTTCATGAAGATCTGCAGCGCTTGGACACATCACTAGAAACAGTGCCAGTAGCGAAGTCCAGCACTGCGAGCAGGAATGATAAAGGAAAAGGCAAATTAATTGATTCTACACCAATGTCCTTAAATACAAAAGCTGTTGTTGGGAAGCAAATTACTGAGGGGCTATCCTCTGCTACACTAGGAAAATTTGTGAGGAAACCTAGAATAGCTGACTCGCCAGATATCAATATTCTCGATAAAAGAGATGAGATAGTTACATCAAAAACTGCTGCTATGGTTTCACAATATGAATATGATGATGAATATGATGATTCCTTCGATGATTTGGGTCTAAGCGTAGCAGACTCTGGAGTAGAGGAAAACGAACTACTAGGTGGCGGAATGAATGCAAAATTTGGAAAATCTTGGGGAACAGAGACAGGAAACACGGCCCAGAGTGCCCCGAATTCAAAATGGGGCTCTAAGAAAAAGCCACAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAAGGTTGCAGGTGCAATAGCAGTGTCAAATTCTGATGAAGCCTCACTGGTTACTCAAGCTCAGCAAGAACAAATACACGGTCTTGGACGTGGTGGCAACCTTCCCATTGGTGCAGTAAAGAAGCTGACAGATTCCTACAAGGAGGGTGGTAACCAATTCCATTCTTCTGAAACAGAAGGGAGAGGGACTATGGGCAATCCTGGAGGCAGGGGAAGGGGGCAACAAACTGAACCCCGTCAGAAGCTGGAGAATCAATCTGTTTCCGAGGTTGAAGGGAACGGGAATGTTTCAAATCCAAGGGGAAGAGGGAGAGGTAGAGGGAGGGGAGGAGGAAGAAACAATCATAACCAGAAGGATCGAGCATTGAAGAAGCATTTCTCTGGAGTGAGTGGTTTTTAG 2607 0.417 MSNRHGQSRHEDNNNNNNNNKGFIKTHQKFVPKNPNPNHAQPSNQNPTLSTSLRDTPPSKSNAPIARVQLGHTGEWVPHRDYGSNGNFVKYLPQDEAVATGLGAEDGALDPLESQRVVDLLNRELSRLLKLKPKEFWKQVATDTSLHEFLDSFLQFRSRWYDFPHRGVKGIVAGVIVGELDLSRRVFMVLYRISSNKDPGARPGDTLSLRDHEVLLQEKKLLELPKLLDICAIYNHENEELTKLLVTNALNAQPWIHNNLTAVISHFLGIVSTMHERCISSLEVLFSSGKPDYQNATFLQADLLEVMDFINDAIVSVDAFVSAYEPATIFFSSPVEMSYGNEELLSVLARLHDSLIPSLQKGFHIIFVDRQDVAVSNIFVSLKMLRMRLVKFGWQLLRSCYLSDEVFRDGIPLPFVTTMFPANVEDPVIRAEILVQTFKKINSVSLSFQEMHQKDTFLQDVERNFNILSRLERLKDDGWMFIDDEQLQYISGIFGSQKEISEESISAITPVPGKTLQMDEDAAIIESKISQIRDLFPDYGKGFLAACLEVYDHNPEEVIQRILEGTLHEDLQRLDTSLETVPVAKSSTASRNDKGKGKLIDSTPMSLNTKAVVGKQITEGLSSATLGKFVRKPRIADSPDINILDKRDEIVTSKTAAMVSQYEYDDEYDDSFDDLGLSVADSGVEENELLGGGMNAKFGKSWGTETGNTAQSAPNSKWGSKKKPQYYVKDGKNYSYKVAGAIAVSNSDEASLVTQAQQEQIHGLGRGGNLPIGAVKKLTDSYKEGGNQFHSSETEGRGTMGNPGGRGRGQQTEPRQKLENQSVSEVEGNGNVSNPRGRGRGRGRGGGRNNHNQKDRALKKHFSGVSGF 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0146 868 Pfam CUE domain 526 566 IPR003892 GO:0043130
Lal4g0146 868 MobiDBLite consensus disorder prediction 814 831 - -
Lal4g0146 868 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 17 867 - -
Lal4g0146 868 MobiDBLite consensus disorder prediction 782 868 - -
Lal4g0146 868 MobiDBLite consensus disorder prediction 702 719 - -
Lal4g0146 868 MobiDBLite consensus disorder prediction 702 724 - -
Lal4g0146 868 MobiDBLite consensus disorder prediction 12 63 - -
Lal4g0146 868 MobiDBLite consensus disorder prediction 784 798 - -
Lal4g0146 868 CDD CUE_ASCC2 526 565 IPR041800 -
Lal4g0146 868 SMART cue_7 524 566 IPR003892 GO:0043130
Lal4g0146 868 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 17 867 - -
Lal4g0146 868 Gene3D - 524 567 - -
Lal4g0146 868 ProSiteProfiles CUE domain profile. 524 567 IPR003892 GO:0043130
Lal4g0146 868 SUPERFAMILY UBA-like 524 581 IPR009060 GO:0005515
Lal4g0146 868 MobiDBLite consensus disorder prediction 1 64 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0146 K18667 - gmx:100778129 1187.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0146 4 894724 902864 Lal4g0146 4 894724 902864 ECH