Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0119 ATGGCTCATCATCACCACTCCCAACGGCACTACCAACCCCAATCACAACCGTCTGATTCTTTCAGAAATATAAATTCAATTCATTTTGACGATCAAATGCCGCAGCCTCCCTCCTATCCCAACCCCAACGATTTCCCTCATCATCCTTTTCATGTTGTTGGGCTTGCTCCACCTGAAGGCAGCTATGGCGGCGCTGATTTGCAATGGAATTACTGTTTAGAGCCAGAGAGAAAAAGACTCAAGGAACATGATTTTATGGAGAGCAATTCTAAGATATCTTGTGTAGAGTTCATGAAACCTCGTTCAGTATCCACTGGATTGGGTTTGTCACTTGACAATACCCGTATGTCTTCTGTTGGCGACTCTCTTTTGTTGTCGCTTTTTGGCAACGATATTGATCGAGAGTTATTGCAGCAGGATGTGGAGATTGATAGATTTCTCAGAGCCCAGGTCATGGTTAGGAAAGAGACCAGTTTTGTTCATCCCGTTCCCCCACTTTCTGGTAGTGTCTTTTTGGTTGAACGGACAGGTAAACGATTAAGGGAAACAATTATAGAGAAAGTTCAGGCAACACAACTTGAGAGCATTTCTATCATTGAAGACAGAGTCGTTCAGAAACTTCGTGAGAAAGAAGCTGAGATAGAAGGCATCAATAAGAGGAACATTGAACTCGAGGAGCGACTGGAGCAGTTGGCCGTTGAAGCAGATGCATGGCAACAGCGAGCAAGTTACAGTGAAAATATGGTTGCTGCTCTGAAGTTTAACCTTGAGCAAGTTTATGCCCAAAGCAGAGACAGTAAAGAAGGATGTGGTGACAGTGAGGTTGATGATACAGCTTCATGCATCAATGGCGGAACCATTGATTTTCATCTGCTCTCGAAAGGGAACAACAATATGAAGGAGATGATGACATGTAAGGTATGCAAAGTGAATGAAGTGAATATGCTTTTATTGCCGTGTAAGCATCTCTGCCTCTGTAAAGATTGTGAAAGTAAGCTGAGTTTTTGTCCTCTATGTCAATCCTCTAAATTTATTGGCATTGAGGTCTATGTGTAA 1056 0.4271 MAHHHHSQRHYQPQSQPSDSFRNINSIHFDDQMPQPPSYPNPNDFPHHPFHVVGLAPPEGSYGGADLQWNYCLEPERKRLKEHDFMESNSKISCVEFMKPRSVSTGLGLSLDNTRMSSVGDSLLLSLFGNDIDRELLQQDVEIDRFLRAQVMVRKETSFVHPVPPLSGSVFLVERTGKRLRETIIEKVQATQLESISIIEDRVVQKLREKEAEIEGINKRNIELEERLEQLAVEADAWQQRASYSENMVAALKFNLEQVYAQSRDSKEGCGDSEVDDTASCINGGTIDFHLLSKGNNNMKEMMTCKVCKVNEVNMLLLPCKHLCLCKDCESKLSFCPLCQSSKFIGIEVYV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0119 351 Coils Coil 200 241 - -
Lal4g0119 351 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 2 351 IPR017066 -
Lal4g0119 351 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 292 351 IPR013083 -
Lal4g0119 351 Pfam Zinc finger, C3HC4 type (RING finger) 303 341 - -
Lal4g0119 351 MobiDBLite consensus disorder prediction 1 43 - -
Lal4g0119 351 ProSiteProfiles Zinc finger RING-type profile. 305 340 IPR001841 -
Lal4g0119 351 PANTHER F2G19.2 2 351 - -
Lal4g0119 351 MobiDBLite consensus disorder prediction 11 32 - -
Lal4g0119 351 PIRSF SBP1_RNase_bind 1 351 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0119 Lal-Chr4 726914 729650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0119 305 341 Miscellaneous Gene Families AT2G21380 48.649 5.80e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0119 K19042 - gmx:100811918 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0119 4 726914 729650 Lal4g0119 4 726914 729650 ECH