Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0105 ATGGAGTCAGAAATGAAAGAGCATAATTCAAAACCGGCGAAACCAAACGGTAATGGCAACAACACTAATACCATTCGTGACGATCGTCCTCTTCTCAAATCTGACTCTACCGTCTCCGTCTCCGTTTCTTGTGATAGCCTCCAAGAAATGGAGAAGAAATACGCTGCGTATGTCAGACGCGACGTTTACGGAACCATGGGGCGCGGCGATTTATCCGTTAAGGAGAAACTCTTACTCTGTTTCGCATTGGTGACACTGTTTCCTATTAGAGTTATTCTTGCTACAACTATTTTGTTCTTCTATTACTTCATATGTAGGGTTTGTACTCTCTTCTATGCTCCTAATAGTGATGATGATCAAGAAGATTATGCTCATATCAGTGGTTGGAGGAGATGTGTTATTGTTGCCTGTGGGAGAGGTCTTTCTAGGGCTATGCTTTTCATTTTTGGATTTTATTGGATCGTTGATTCCTCTCTTGATCACAACTCTGCTATACAGGAAGATAAACATCAGCCCGAGGAGATTGGAGGACCTGGCGTGATAATATCAAATCACGTGTCGTACTTGGATATTTTGTACCACATGTCTTCCTCATTCCCAAGTTTTGTTGCTAAGAAATCAGTGTCTAAACTTCCCTTCGTTGGTCTCATCAGCAAGTGCCTTGGTTGTGTCTATGTTCAGCGAGAATCAAAGTCATCAGATTCCAAGGGTGTTTCAGCTGTTGTAACCGAGAGAATAAAAGAAGCTCATCAGAATAAATCCGCTCCACAAATGATGCTATTTCCAGAAGGTACAACCACAAATGGAGACTTCCTCCTTCCATTCAAGACTGGAGGTTTTTTGGCACAGGCACCAGTACTTCCTGTAATTTTAAAATACCATTACCAGAGGTTTAGTCCAGCCTGGGATTCCATATCTGGGGTGCGGCATGTGATTTTTCTCCTGTGTCAGTTTGTAAATTATATGGAGGTGATACGATTACCTGTTTACTATCCCTCACAGCAGGAGAAGGATGATCCCAAACTATATGCTAATAATGTCAGAAGGTTGATGGCTAGTGAGGGCAACTTGGTACTTTCTGATATTGGGCTAGCTGAAAAAAGAATATACCATGCTGCTCTCAATGGTAATATGCCTAGTGTTTTGCATCACAAAGACGAGTGA 1164 0.4192 MESEMKEHNSKPAKPNGNGNNTNTIRDDRPLLKSDSTVSVSVSCDSLQEMEKKYAAYVRRDVYGTMGRGDLSVKEKLLLCFALVTLFPIRVILATTILFFYYFICRVCTLFYAPNSDDDQEDYAHISGWRRCVIVACGRGLSRAMLFIFGFYWIVDSSLDHNSAIQEDKHQPEEIGGPGVIISNHVSYLDILYHMSSSFPSFVAKKSVSKLPFVGLISKCLGCVYVQRESKSSDSKGVSAVVTERIKEAHQNKSAPQMMLFPEGTTTNGDFLLPFKTGGFLAQAPVLPVILKYHYQRFSPAWDSISGVRHVIFLLCQFVNYMEVIRLPVYYPSQQEKDDPKLYANNVRRLMASEGNLVLSDIGLAEKRIYHAALNGNMPSVLHHKDE 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0105 387 SMART plsc_2 179 294 IPR002123 GO:0016746
Lal4g0105 387 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 22 386 - -
Lal4g0105 387 MobiDBLite consensus disorder prediction 13 27 - -
Lal4g0105 387 Pfam Acyltransferase 173 289 IPR002123 GO:0016746
Lal4g0105 387 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 22 386 - -
Lal4g0105 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 140 358 - -
Lal4g0105 387 CDD LPLAT_LPCAT1-like 143 368 IPR045252 GO:0008374
Lal4g0105 387 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0105 Lal-Chr4 646404 655803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0105 1 376 Acyl Lipid Metabolism Gene Families AT1G80950 60.302 6.17e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0105 K13510 - gmx:100820536 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0105 4 646404 655803 Lal4g0105 4 646404 655803 ECH