Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0102 ATGTTTCACCGCAAGAGCAATTCACAGCATGACAACGACGGTGACGAGCAGCTTAATAACAAATCCAAGATTAAAGAGCTCGAGGATGCAATTGGACCGTTATCTGGGAACAGCTTCAAGTACTGCACTGCTGCTTGTTTGAGGAGATATCTGGAAGCTCGCAATTGGAATGTAGACAAGTCCAAGAAGATGTTGGAGGATACACTCAGGTGGAGATCAACCTATAAGCCCGAATATATCCTCTGGAATGAGGTTGCTGGGGAAGGGGAGACCGGAAAACTGTTCAGAGCAAATTTTCATGACCGACAGGGAAGGACAGTTCTTATATTGAGGCCTGGAAAGCAGAACACATCTTCAATTGAGAATCAAATTCGGCACCTCGTGTATCTTTTGGAAAATGCTATGCTTAACCTTCCACCAGGTCAGGAACAAATGTCATGGTTAATAGACTTCACGGGATGGTCTTTGAGAAGCACTGTGCCCATTAAGTCAGCCAAAGAGACTATCAACATCTTACAGAACCACTATCCCGAGAGGCTTGCCGTAGCATTTCTTTACAACCCCCCTTGGGTTTTTGAAACTTTTTGGAAGATAGTGAAGTATTTCTTGGATACCAAGACATTTCAGAAGGTGAAGTTTGTTTACCCCAAAAACAAAGATAGTATGGCGCTCATGAATTCTTATTTTGATGAGGAGAATTTACCCAAAGAACTTGGAGGAAAAAGCATATTGGACTACAACCATGAGGAATTTTCCAGATTAATGGCTCAGGATGATCTGAAATCTGCAGCCTTTTGGGGATCCGAAGACAAGCTCCCAAGCTACATTGGTAATGGGCGTTCTGGAGCAGAGGTAGCCCCAGATCCAGCTTGCCGTGAAACTGCGGGGACCTGA 894 0.443 MFHRKSNSQHDNDGDEQLNNKSKIKELEDAIGPLSGNSFKYCTAACLRRYLEARNWNVDKSKKMLEDTLRWRSTYKPEYILWNEVAGEGETGKLFRANFHDRQGRTVLILRPGKQNTSSIENQIRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSLRSTVPIKSAKETINILQNHYPERLAVAFLYNPPWVFETFWKIVKYFLDTKTFQKVKFVYPKNKDSMALMNSYFDEENLPKELGGKSILDYNHEEFSRLMAQDDLKSAAFWGSEDKLPSYIGNGRSGAEVAPDPACRETAGT 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0102 297 MobiDBLite consensus disorder prediction 278 297 - -
Lal4g0102 297 Gene3D - 3 277 IPR036865 -
Lal4g0102 297 SUPERFAMILY CRAL/TRIO N-terminal domain 19 84 IPR036273 -
Lal4g0102 297 PANTHER GH16843P 8 290 - -
Lal4g0102 297 Pfam CRAL/TRIO domain 100 240 IPR001251 -
Lal4g0102 297 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 82 246 IPR001251 -
Lal4g0102 297 SMART sec14_4 88 243 IPR001251 -
Lal4g0102 297 SUPERFAMILY CRAL/TRIO domain 82 252 IPR036865 -
Lal4g0102 297 CDD SEC14 100 241 IPR001251 -
Lal4g0102 297 Pfam CRAL/TRIO, N-terminal domain 44 67 IPR011074 -
Lal4g0102 297 PANTHER RANDOM SLUG PROTEIN 5-LIKE 8 290 - -
Lal4g0102 297 SMART CRAL_TRIO_N_2 43 68 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0102 Lal-Chr4 624375 626952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0102 47 222 Acyl Lipid Metabolism Gene Families AT5G47730 27.083 1.14e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0102 - - aprc:113847293 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0102 4 624375 626952 Lal4g0102 4 624375 626952 ECH