Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0098 ATGCGATTTCTAAAGAGACCACTTTCATTTTCCTTCTTCAATTTCTCTCCTTCTCTTTTCTATTCTCCTTCCCGAATCTGTGCCAAACCTCTTCCCTCTCTCGCTAACGCCGCCACGTCACCAGGAGTTAACCGATTGCGCTGTCAATATCTAATGGTTGGGAACCATGGAATTGGTGTAGGTGATGGAAGATCAGTGGAATTATGTGGCAGTGATAGTGGCAAACAGCCATGTGTGTTGTCATCTTCGTCTCCAAGACATGGATGTAAAACTGATATAGGCAAGCATATCTTTTGTAACAGGTCACTGAATATGAAGAACATTGTTGCTGTCGGATTTGACATGGATTATACTCTGGCGCAATACATGCCTGAAACCTTTGAGTCTCTTGCTTATCAAGGCACAATTAAAAAGCTGGTTTATGATTTGGGGTATCCTCGAGAGTTACTAAACTGGACTTTTGACTGGAAGTACATGGTCAGAGGCTTGGTTGTTGACAAAAAAAGAGGCAACATCTTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCATGGATTTAAAGAGTTGTCAAAAGAAGATAAAGTTGGGACCTATGGAAATACTTTAGTACGTGATTCTTTTGATGAGCCAGACTATGCTCTAATTGATACACTCTTTTCACTGGCTGAAGCATACTTGTTTGCTCAACTGGTTGATTTTAAGGATGGGAGTCCTGGAAAAATTCAAGAGGGTGTTGATTATGCTCGCATGTACAAAGATGTTCGAGCAGCAGTTGATTTGTGCCACCGTGATGGAACATTGAAGCAAATGGTTGCTAAAGATCCCAAAAGGTATATTAATGAAGACACCACAATAGTGCCCATGTTTGAAATGCTCAGAGAATCCGGACGTGCAACATTTTTAGTGACAAACAGTTTATGGGACTACACAAATATTGTCATGAATTTCCTCTGTCAATCCAACATGGCAGATGGCACCAACAATTTTGACTGGCTTCAATACTTCGATGTTGTCATCACTGGCAGTGCAAAGCCGGGATTTTTTCACGAAGAAAATCGTGCCAACCTATTTCAGGTTGTGCCTGAGACTGGGATGCTACTTAATACAGATAATGGCTCTCCAATGCCTCAGGTGGGTAATACCTCAGCAAGGTTATTCATGGATGATGGAAAGCACGCTTGTCCAGTTTTCCAGGGAGGCAGCGTTGGTCATCTGCATAAACTACTTTCCGTTGAATCAAGCTCACAGGGACTTATCGTGGCAGTTGTTGATCTAGGAATTCTAGTACTTCAGGATTGTAGGTTTATTGAGGCTTCCTGTAATAATCTCATTGCTTTACGTGTAGGTTCTGTATGTTGGGGATCACATTTATGGAGATATATTACGCAGCAAAAAGGCTCTTGGAGTATAGAACTATGGATAACTAGAAATGTAAGATGGAGAACAATGCTTGTAATCCCAGAGCTTGAGAAGGAGATTAAACTCCTCTGGGAATCAAGGGATACCCGCAAGTCAGCCATAAGTTTGACAGAATTCTTCCAAGATTCAAGGGTGGCTATTGGATGGGATGAAATGGTAGGGATTCTCCCATCCGAGAGCCGCCACCAAGCATGTCGAAATTATTGTCAAAATTTCTGGCAACCTAGCATTTTTCAAAAGAAATGGTCTTCTGACATTTTTGTTGAGGAACTCCAATTCCTTAGGAGTGAGCGTAATTGTATTGAGGATGGAATACATCATTTAAGGTGGTCTCTCAAATTCAAGAATCCAGGTTCTGATGCCAAGCAGAATTTATCTTCAGAACTTGATAAATTGGAGCTTGAAAGAGAGAGAGTACGATTGAGCCATCAAGAAGCACAGCGAAAATTGCATAAAAGGTTTCACGAGCCATGGGGTCAGCTTCTGAAAACTGGTTATCAAAAATCTCGATTTGCACATCAGGTTGAAAGATTTGCATGCCTTTATACTAGCAAAGTATCTAACCTGGCCTTGTACTCTCCAGAGAAGTATTACAGACCCAGTGAAGACTTCATGCAACATGAATTTGGAATTCTGGCTTATGAGCCGCGTGAAATGTAA 2085 0.4139 MRFLKRPLSFSFFNFSPSLFYSPSRICAKPLPSLANAATSPGVNRLRCQYLMVGNHGIGVGDGRSVELCGSDSGKQPCVLSSSSPRHGCKTDIGKHIFCNRSLNMKNIVAVGFDMDYTLAQYMPETFESLAYQGTIKKLVYDLGYPRELLNWTFDWKYMVRGLVVDKKRGNILKMDRHKYVKVAYHGFKELSKEDKVGTYGNTLVRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDGSPGKIQEGVDYARMYKDVRAAVDLCHRDGTLKQMVAKDPKRYINEDTTIVPMFEMLRESGRATFLVTNSLWDYTNIVMNFLCQSNMADGTNNFDWLQYFDVVITGSAKPGFFHEENRANLFQVVPETGMLLNTDNGSPMPQVGNTSARLFMDDGKHACPVFQGGSVGHLHKLLSVESSSQGLIVAVVDLGILVLQDCRFIEASCNNLIALRVGSVCWGSHLWRYITQQKGSWSIELWITRNVRWRTMLVIPELEKEIKLLWESRDTRKSAISLTEFFQDSRVAIGWDEMVGILPSESRHQACRNYCQNFWQPSIFQKKWSSDIFVEELQFLRSERNCIEDGIHHLRWSLKFKNPGSDAKQNLSSELDKLELERERVRLSHQEAQRKLHKRFHEPWGQLLKTGYQKSRFAHQVERFACLYTSKVSNLALYSPEKYYRPSEDFMQHEFGILAYEPREM 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0098 694 Pfam 5' nucleotidase family 97 416 IPR008380 -
Lal4g0098 694 Pfam 5' nucleotidase family 561 684 IPR008380 -
Lal4g0098 694 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 97 416 IPR008380 -
Lal4g0098 694 Coils Coil 597 624 - -
Lal4g0098 694 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 479 511 IPR008380 -
Lal4g0098 694 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 21 422 IPR008380 -
Lal4g0098 694 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 563 687 IPR008380 -
Lal4g0098 694 SUPERFAMILY HAD-like 580 685 IPR036412 -
Lal4g0098 694 PIRSF NT5C2 74 419 IPR016695 -
Lal4g0098 694 PIRSF NT5C2 474 693 IPR016695 -
Lal4g0098 694 Gene3D - 258 517 IPR023214 -
Lal4g0098 694 Gene3D - 93 142 IPR023214 -
Lal4g0098 694 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 21 422 - -
Lal4g0098 694 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 479 511 - -
Lal4g0098 694 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 563 687 - -
Lal4g0098 694 SUPERFAMILY HAD-like 95 416 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0098 Lal-Chr4 605811 611689 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0098 - - vun:114164304 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0098 4 605811 611689 Lal4g0098 4 605811 611689 ECH