Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0094 ATGGGTTGTTTGAAAGTAGTAGGGTTATGCAGTGTCCCTCCGATGATTGGATCAGTGAACGCTACGTGTATTAGAACTCAATTTTTGGGACTCGCTCCTTCCAAAGCTAAACCTAATTTAAATTTGAGAAAGTGCAAGACTGTGCATTGCAGTTTCAATTCATCCTCAAACGGTAGTGGAAGTATGCCTCAAAACTTTCATGAAAAAGATGATGATTATGTTAACTCTAGTGTTGTTGAAGCTGTTGAGGTGAAGAGTGGAGCAGATGGTTTCATGATGAAGATGAGAGATGGTAGACAGTTAAGGTGCATCCATAACAACCCTCATGGTGGAATTATTCCAGATTATGCGCCTCATCCTGCTATTGTCTTAAAGATGGAGGATGGGACTGGTCTACTTCTCCCAATTATTGTTTTGGAGATGCCAAGTGTCTTACTAATGGCAGCCGTACGCAATGTTCAAATAGCTAGACCTACATTATATCAAGTAGTGAAGGAGATGGTTGACAAAATGGGATACAAAATCAGAGTTGTTAGAGTCACTAAGAGAGTTCAGGAGGCTTATTTTGCTGAGTTATACATTTCCAAGGCATTTACTAACTTTGCACTCTTCCTCCTTCTCACCCTCAATGAAAAAATTAAGAATAAAGGCACAGTATCATTTACCTCAAAGGAGTGTATGACTTATTTGATACAGGTTGGAAATGAGGCAGAATTTCTGAGTTTTGACCTTCGACCTTCAGATGCTATCAACATTGCAGTGAGATGCAAGGTTCCAATACAAGTCAACAAGTCCCTGGCATACAGTGATGGAATGAGAGTAATTGAATCAGGCAAACTGTTAACACAGTCGCCTGGTTCAGATGGCCCATTAATTACTACTGAAATGGACCGGCCAAGTGGTAAGCCTTGTACTGAAACAAAGGAGTTCAATCTTTTGCACAACATGTTGAAAGCTGTTGTTGAAGAGCGCTATCAAGATGCTGGTTTTGAAGAATTCTCAGGCCACAATGAAAGAAGAGAGCAGAAATTGGACTTTGGGAACTCAGAGGATGATAAGTGCACAAGAATTGGGAGTCTTAAAAAGAAAGCACTAAATGCATCCACCAAATTCAGGCACTCTCTTAATAAGAAAAGAAGCAGAAAGGGCGGTAGTTCGAGTAATTCGCTCTCCATCGAGGACATTCGCGATGTTGAGGAGCTTCAAGCAGTGGATGCATTTCGACAGGCACTTATGTTAGATAACTTGCTGCCTCCAAGACATGATGACTATCATATGTTATTGAGATTCTTGAAAGCAAGGAAGTTCGATATCGAGAAAGCAAAGCACATGTGGGCTAACATGATCCAGTGGAGAAAAGAACATGGTACAGATACTATTTTAGAGGATTTTGAATTCATGGAGCTATCTGAAGTCCTGCAGTACTATCCACAAGGTCACCATGGTGTAGATAAGGAAGGAAGGCCTATTTATATTGAGAGGCTAGGCAAAGTTGATCCAAATAAGCTTATGCAAGTAACTACCATGGAAAGATATTTGAGATACCATGTGCAGGGTTTTGAGAAAACATTTGCTGTTAAATTTCCAGCTTGCTCTATAGTTGCAAAGAGACATATAGATTCAAGTACAACCATTTTAGATGTCCAAGGCGTGGGTTTCAAAAACCTTACCAAGTCTGCACGGGAACTCATCATCCGGCTGCAGAAGATTGATAGTGATTACTATCCTGAAACACTCAGCCGAATGTTTATCGTCAATGCTGGTCCTGGTTTTAAGTTGCTCTGGAACACAGTAAAAACATTTCTTGATCCGAAAACTACTACAAAGATTCATGTTCTTGGAAACAAGTTTCAGAGTAAATTACTTGAAATTATAGATGACAGTGAGCTGCCCGAATTTCTAGGTGGTAGTTGTACTTGTGTAGACCAGGGTGGTTGTATGATTTCTGATAAAGGGCCATGGCAAGATCCAACCATTTTAAAGATGGTTCTTAGTAGTGAAGTGCAATGTTCTACACAAATAGTAAGAGCTTCTAAGGGGAAGGTGGTTGGTGGTGGAAAAACATCTTATCCAGCGATAAAAGCTAGTGATACATTTACTGTGGAATCAGGATCTGAAGTTGATGATATCACTTCTCCCAAAGCAAGTGGGACTTATATAAGCTCTACATTGACTCCCCTCCATGAAGAAGTAAGTTACCATGACATTGATCTTGAGGCAAGATTGGTTGGCACTGCTGGGCATGCCGGTGGTTACTCTGAGTGTGATGAATGTACCCGCATGGTTGACAACACTGTCGATTTTGGATCGAAAAAGAAGCAAGAATCATCTCAAAACCCATTTGGCCAAACAGAAAATTTCCCATTGAGTGGCCTTCTTTGGCATCCAAGAAAACTATTTCCTGATGGCAACTACTGTGCATATATATGGGCTGTTATAGTGGCCTTCTTTCTTGCCCTTTTTACTTCTGCTCGTACGATAGCATTTTGTGTCACCAACAGAATACGTAGCATGAGTGTTGATTCAATATCAAAGGAGGATAACCTCCAATCTGCCTTAAAACGCATTGGTAAGCTAGAAGAAAAAGTTGACATGCTACAGTTAAAACCTACTATGATGCCACATGAGAAAGAGGAACTGCTGAATGATGCAGTTTGTCGCATGGATGCATTGGAAGTAGAACTGATTACTACAAAGAAGTTTGCTGAGAACATCTTTTATGGGAACTTGTTCCTAATGAGGAAAAAAGAACTCAAACCTCTTGAGTTTGGCTCCTCTCCTGTAATGGAGAGGCCAGTGAGCTCTCAGATTGCGACACGTGTAATACAAAAAATGGACGGCTGA 2844 0.4061 MGCLKVVGLCSVPPMIGSVNATCIRTQFLGLAPSKAKPNLNLRKCKTVHCSFNSSSNGSGSMPQNFHEKDDDYVNSSVVEAVEVKSGADGFMMKMRDGRQLRCIHNNPHGGIIPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQVVKEMVDKMGYKIRVVRVTKRVQEAYFAELYISKAFTNFALFLLLTLNEKIKNKGTVSFTSKECMTYLIQVGNEAEFLSFDLRPSDAINIAVRCKVPIQVNKSLAYSDGMRVIESGKLLTQSPGSDGPLITTEMDRPSGKPCTETKEFNLLHNMLKAVVEERYQDAGFEEFSGHNERREQKLDFGNSEDDKCTRIGSLKKKALNASTKFRHSLNKKRSRKGGSSSNSLSIEDIRDVEELQAVDAFRQALMLDNLLPPRHDDYHMLLRFLKARKFDIEKAKHMWANMIQWRKEHGTDTILEDFEFMELSEVLQYYPQGHHGVDKEGRPIYIERLGKVDPNKLMQVTTMERYLRYHVQGFEKTFAVKFPACSIVAKRHIDSSTTILDVQGVGFKNLTKSARELIIRLQKIDSDYYPETLSRMFIVNAGPGFKLLWNTVKTFLDPKTTTKIHVLGNKFQSKLLEIIDDSELPEFLGGSCTCVDQGGCMISDKGPWQDPTILKMVLSSEVQCSTQIVRASKGKVVGGGKTSYPAIKASDTFTVESGSEVDDITSPKASGTYISSTLTPLHEEVSYHDIDLEARLVGTAGHAGGYSECDECTRMVDNTVDFGSKKKQESSQNPFGQTENFPLSGLLWHPRKLFPDGNYCAYIWAVIVAFFLALFTSARTIAFCVTNRIRSMSVDSISKEDNLQSALKRIGKLEEKVDMLQLKPTMMPHEKEELLNDAVCRMDALEVELITTKKFAENIFYGNLFLMRKKELKPLEFGSSPVMERPVSSQIATRVIQKMDG 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0094 947 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 323 918 - -
Lal4g0094 947 SUPERFAMILY CRAL/TRIO N-terminal domain 398 464 IPR036273 -
Lal4g0094 947 Pfam CRAL/TRIO, N-terminal domain 422 447 IPR011074 -
Lal4g0094 947 SMART sec14_4 468 639 IPR001251 -
Lal4g0094 947 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 323 918 - -
Lal4g0094 947 SUPERFAMILY Hypothetical protein TM0160 103 197 IPR036104 GO:0004518
Lal4g0094 947 Pfam Bifunctional nuclease domain 122 271 IPR003729 GO:0004518
Lal4g0094 947 PRINTS Cellular retinaldehyde-binding protein signature 426 448 - -
Lal4g0094 947 PRINTS Cellular retinaldehyde-binding protein signature 595 614 - -
Lal4g0094 947 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 103 274 IPR003729 GO:0004518
Lal4g0094 947 Gene3D Bifunctional nuclease domain 110 279 IPR036104 GO:0004518
Lal4g0094 947 MobiDBLite consensus disorder prediction 332 351 - -
Lal4g0094 947 SUPERFAMILY Hypothetical protein TM0160 234 277 IPR036104 GO:0004518
Lal4g0094 947 Gene3D - 374 455 - -
Lal4g0094 947 Gene3D - 456 667 IPR036865 -
Lal4g0094 947 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 468 642 IPR001251 -
Lal4g0094 947 CDD SEC14 469 636 IPR001251 -
Lal4g0094 947 SUPERFAMILY CRAL/TRIO domain 469 662 IPR036865 -
Lal4g0094 947 Pfam CRAL/TRIO domain 474 636 IPR001251 -
Lal4g0094 947 Coils Coil 849 869 - -
Lal4g0094 947 SMART CRAL_TRIO_N_2 423 448 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0094 Lal-Chr4 570184 587411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0094 402 633 Acyl Lipid Metabolism Gene Families AT5G47730 28.629 1.18e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0094 - - dzi:111312741 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0094 4 570184 587411 Lal4g0094 4 570184 587411 ECH