Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0090 ATGGCGAAGCAGCATAATGCGCAAGCGTGGATGACAATGGCGAAGAAGAGTTGCGCGCTAATGTTACTAACATTGTTCTCTCTATCAACTGTTATGATTGTGTTAATGAGAGCCAACAATTCTGATTCCTGTCACAATTTACTAACACAACAAAACGAGATTCGATCACCTTCCTCCATGGAACCTAGTCCTTTAGATTTCATGAAGTCTAAGCTAGTTCTCATGGTTTCACACGAACTCTCTCTTTCAGGTGGACCCTTACTTCTTATGGAGTTAGCGTTTCTCTTAAGAGCCGTTGGTTCCGACGTCGTTTGGATCACTAATCAGATTCCTCCTCAACCTGACCACGTTCTTTACACCTTAGAGTCTAAGATGTTACACAGAGGAGTTCAGGTGATGCCTGCTAGAGGGGAAAAGGCTATAGATACAGCTCTTAAAGCTGATTTGGTCATTCTAAATACTGCTGTGGCTGGAAAGTGGCTCGATGCGGTTCTTCCAAAGGATAAACTTTCCGTTGTCCTTCCAAAGGTTTTGTGGTGGATTCATGAAATGCGAGGCCATTATTTCAAAGTGGAATATGTTAAGCACCTCCCTTTTGTTGCAGGTGCTATGATTGATTCTCATACAACTGCTGAGTACTGGAAGAATAGGACTAAGGAGCGTTTAGGGATTAAAATGCCTGATACGTATGTTGTGCATCTTGGTAATAGCAAGGAGCTTATGGAAGTTGCTGACGATAGGGTTGCAAAGAAGGTTCTTCGTGAGCATATTCGGGAGTCTCTTGGAGTCAGAAACGATGATCTACTTTTTGCCATCATAAATAGTGTTTCACGTGGTAAAGGGCAGGATCTATTTCTCCGCTCCTTTCATAAAAGTTTGCAATTCATTCAGGAGAAGAAACTGCAGTTGCCATCTTTGCATGCTGTAGTTGTAGGGAGTGATATGAACAAACATACAAAAACTGAAATGGAACTGCGCAAATTTGCCATTGATAATAAGATTCAAGACCGTGTTCACTTTGTTAACAAAACCCTGGGAGTGGCTCCTTACCTGGCTTCTATTGATGTTCTTGTTCAGAATTCTCAGGCACGTGGAGAATGCTTTGGAAGAATAACCATTGAAGCAATGGCATTTCGTCTGCCTGTACTGGGCACCGCAGCTGGGGGCACAATGGAGATTTTGGTGAATGGAACAACGGGTTTGCTGCATCCTGTTGGAAAAGAAGGCGTAACACCTCTTGCAAATAACATTGTGAAATTGGCAAGTCATGTTGAGAAGAGGTTAACGATGGGAAGGAAAGGGTATGAGAGAGTGAAAGAGATGTTTCTGGAGCACCATATGGCAGATAGAATTGCATTGGTTCTTAAGGAAGTTTTAGGGAAGGCTAAGAACAATTAA 1398 0.4249 MAKQHNAQAWMTMAKKSCALMLLTLFSLSTVMIVLMRANNSDSCHNLLTQQNEIRSPSSMEPSPLDFMKSKLVLMVSHELSLSGGPLLLMELAFLLRAVGSDVVWITNQIPPQPDHVLYTLESKMLHRGVQVMPARGEKAIDTALKADLVILNTAVAGKWLDAVLPKDKLSVVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTKERLGIKMPDTYVVHLGNSKELMEVADDRVAKKVLREHIRESLGVRNDDLLFAIINSVSRGKGQDLFLRSFHKSLQFIQEKKLQLPSLHAVVVGSDMNKHTKTEMELRKFAIDNKIQDRVHFVNKTLGVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTMEILVNGTTGLLHPVGKEGVTPLANNIVKLASHVEKRLTMGRKGYERVKEMFLEHHMADRIALVLKEVLGKAKNN 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0090 465 CDD GT4_PimA-like 97 456 - -
Lal4g0090 465 Gene3D Glycogen Phosphorylase B; 243 442 - -
Lal4g0090 465 PANTHER GLYCOSYLTRANSFERASE 1 464 - -
Lal4g0090 465 Pfam Glycosyl-transferase family 4 69 248 IPR041693 -
Lal4g0090 465 Pfam Glycosyl transferases group 1 255 437 IPR001296 GO:0016757
Lal4g0090 465 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 68 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0090 Lal-Chr4 545787 552660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0090 33 463 Glycosyltransferase AT1G75420 74.194 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0090 - - gmx:100791337 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0090 4 545787 552660 Lal4g0090 4 545787 552660 ECH