Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0042 ATGAGCAGGAGCTTAGGAATACCAGTGAAGCTACTCCACGAGGCGTCCGGTCATGTGGTGACGGTGGAGCTTAAAAGTGGAGAGCTTTATAGAGGCAACATGATTGAATGTGAGGACAACTGGAACTGTCAACTTGAGAGCATTACCTACACCGCCAAGGATGGAAAAACATCCCAACTTGAGCATGTATTTATTCGAGGGAGCAAAGTCAGGTTTATGGTCATCCCTGACATGCTGAAGAATGCTCCAATGTTTAAGCGTTTGGATGCAAGAGTCAAGGGCAAGGGTGCATCACTCGGTGTTGGTAGGGGCAGAGCAGTTGCTATGCGAGCGAAGGCTCAAGCTGCTGGGCGTGGAGCTGCACCTGGAAGGGGTGTACCACCTGTTCGGAGGTGA 396 0.5076 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGASLGVGRGRAVAMRAKAQAAGRGAAPGRGVPPVRR 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0042 131 SUPERFAMILY Sm-like ribonucleoproteins 8 125 IPR010920 -
Lal4g0042 131 Pfam LSM domain 11 74 IPR001163 -
Lal4g0042 131 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3 1 128 - -
Lal4g0042 131 Gene3D - 3 86 - -
Lal4g0042 131 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 128 IPR027141 GO:0006396
Lal4g0042 131 CDD Sm_D3 8 77 IPR034099 GO:0000387|GO:0005681
Lal4g0042 131 SMART Sm3 10 75 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0042 Lal-Chr4 256130 258044 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0042 K11088 - gmx:100305856 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0042 4 256130 258044 Lal4g0042 4 256130 258044 ECH