Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0035 ATGGATCAGTTCGATGCGTATTTCAGAAGAGCAGATTTAGACGGAGATGGCAGAATCAGTGGTGCTGAAGCTGTTTCTTTCTTTCAGGCTTCCAATTTGCCTAAACACGTTCTTGCCCAGATATGGATGCATGCTGATCAGGCCAAAACTGGTTTCCTTGGTCGGAATGAGTTTTATAATGCTCTTAGGTTAGTAACCGTTGCTCAGAGTAAGCGTGATTTAACGCCTGATATTGTCAAGGCAGCCTTATATGGCCCCGCTGCTGCTAAGATCCCTCCACCACAGATCAATCTCGCTGCTATACCTCCGCTTCAAGGGAATCGGCCAGCCGTTGCTCCTGCTCCTGTTCCGGAGATGGGTGTAAGTACATCACCAGCACCAACTCAAAGTTTTCCGTATAGAGGACAGCAAGGGTTATCAGGTCCTGTTCCAAACCCACAATACTTTCCTTCACAGCAGACTACAACCATGAGACCACCTCAACAACCCATGCCCACACCGCAAACCATGCCTGCTAGTAGCGCTCCCCGTCCACAACAGGGCTTTGCTACAGGTCCAGATATTTCTAGAGGAGGTAACATGCCAGGACAGACTTTCTCAAGTCCTGGCTTCTCAAGTGATTGGAATAGTGCTAGGCCTGGTATGGTTGCTACTAGGCCTGGTATGGTTGCTACTAGGCCTGGAGGAATCACTCCATCCGGTCCTTTATCAACATCAACAGTCCTTTCTCCAGTCTCACCAATGTCCCAGCCAACAACTGTTGACATTAAAGCATTAGCTGGTCCCGGAAACGGGCCCTCTCCCAATTCAGCTTTGGGCAATGATTTTTTCTCTGCTGCCTCATCCACACCAAAAACAGAACCTGCTGGACAGAATTTCTCTTTTAGCGTTGGTCCTCCCTCATCAGCCACTGTTCCAGTTTCTAATGATGCCCAACCTAAGCAAAATCCACTTGATTCACTGCAGAGTTCATTCTCGATGCAGCCTGTAAACAGTCAGTTTCAGCGGACACAGCCTGCAGCAAACAGAAGCAATGCAAGCCAGAAGATTTCACCACCAGCTTCTTCTCCACATGCATCATCTGGGATATCAGTTGGACTTGGAAATACTAATTCTGACAATTCACAGTTTTCTTGGCCAAAAATGAAACCTGCTGATGTGCAGAAGTATACAAAGGTATTTATGGAAGTTGACACTGACAGGGATGGAAAAATCACAGGGGAGCAGGCACGCAGTTTATTTTTAAGTTGGAGGTTACCTATAGATGTCTTAAAGAAGGTGTGGGATTTATCAGATCAGGATAATGATAGCATGCTTTCTTTGAAGGAGTTTTGCTTTGCTCTTTATTTGATGGAGCGGTACAGGGAAGGCCGACCTCTTCCACAATCTCTTCCAAGTAATGTTTTATTTGATGAGACACTGCTGTCTATGATGGGCCACCTGAAACCTACGTATGGAAATGCAGCCTGGGGCATGGGCCAAGGTTTTCAGCCTCAACCAGGGATGCCAGGTGCTCGGCCTTTGACACCGGCAGCTGGTTTGAGCCCCCCAGTGCAAGGAACTTCTCCTCCAGCTTCTGGAACTATGCAGCCCAATCAGCAAAAGTCAGGTGCTCCAGTGTTGGAAGATTCCTTTTTGAATCCCACAGATAATGGCAATCAGAATATATTAAACTCAGAGTCTAAAGAAGCAGTATCAGCTGGGAAAACGGTTAAAGAAACAGAAAATGTGATTTTGGATTCAAAAGAGAAGATGGTGTTCTACCGCGACAAAATGCAGGAACTGGCGAGTAATTCTTGTCTTTGGGTGAATGTATGCTATGAACCTGATGGGCTTGAACAAGTTCTGTATAAAAGCAGGTGTGATAATCGACTGAATGAGATTACAGAAAGGGCATCTGCAGATAAGTCTGAGGCAGAGACATTGGGCAAGAAATATGAAGAGAAATACAAACAAGTAGCAGAAATTGCATCCAAGTTGACTGTAGAAGAAGCCAAGTTCCGTGATATACAGGAAAGGAAAGCAGAGTTGCAGCAAGCCATTGTGAAAATGGTTCAAGGAGGCAGTGCTGATGGTATTCTTCAGGTCCGTGCTGAACGCATACAGTCAGATCTTGATGGATTATTTAATGCTCTATCTGAACGATGCAAGAAACATGGGATAGATGTGAAGTCAATTACAATGGTTCAGCTTCCTGCTGGGTGGCAACCTGGAATTGCGGAGGATACATCTCTCTGGGATGAAGATTGGGATAAATTTGAAGACGAAGGATTTGCCAATGATCTCACATTTGATACGAAAAATGCATATTCAAAACCTGCAATCATTCACGAGGAACAAAGTTTCCCTGATGACCACTCAGTTGATTCACCCATGAATGCAAATGGAAAGCATGAAAATTCTACCAATGGTGATTATACAGTTGAGGATGATTCTTCTCATGCACACAGTGAAGATGACTTGGGAAGAAGTCCTCGTGATAGTCCAGCTGGAAAGACTACGGTGGAGAGTCAAGAAATTTCAAATGCTCATTTTGGAAAAAGTATGGAAGCAGATGCAGAAACACATAGAAGTTTTGATGAATCAACCTGGGGTGCATTTGACAATAACGATGATGTGGATTCAGTCTGGGGTTTTAACCCTACCAAGGACTCTGACTTGGACCACCAGAAAGATTTCTTTACATCTGGTGATGATTTTGGTATAAACCCAATTAGAACAGGATCTAGACATGCAGATGGCACCTTCCAGATAAAGAGCCCATTTACTTTTGACGATTCAGTGCCTGCAACTCCAGCTTCCAAGTTTGGCAACTCTCCAAGGTACAGTGAGGCAGGGGACTTCTTTGACATGTCGTCAAGGTTTGAATCCTTCAACATGCACGAAAGTGGATTTTCTCCCAAAGCAGAGCCGGGGTTTACGAGATTTGATTCCATCAGCAGCAGCAAGGATTTCGGCTACAATCCTGGGAGTCTCACAAGGTTTGATTCAATCAGTAGCAGCAAAGATTTTGGCTTCGGTCGTGAGGTGGGGCATACTAGGTTTGACTCGATTAGTAGCACCACAGGGCATGCAAGGTTTGACTCGATTAGTAGCACCAAAGACTTCGATCACAGTGGTGCATTTTCATTTGATGAACCTGATCCATTTGGCTCTACTGGCCCATTTAAGGTCTCTTCACAGAGTCATTCTCCAAAGAAAAGTTCGGGTGGGTGGAGTGCATTCTAG 3228 0.4507 MDQFDAYFRRADLDGDGRISGAEAVSFFQASNLPKHVLAQIWMHADQAKTGFLGRNEFYNALRLVTVAQSKRDLTPDIVKAALYGPAAAKIPPPQINLAAIPPLQGNRPAVAPAPVPEMGVSTSPAPTQSFPYRGQQGLSGPVPNPQYFPSQQTTTMRPPQQPMPTPQTMPASSAPRPQQGFATGPDISRGGNMPGQTFSSPGFSSDWNSARPGMVATRPGMVATRPGGITPSGPLSTSTVLSPVSPMSQPTTVDIKALAGPGNGPSPNSALGNDFFSAASSTPKTEPAGQNFSFSVGPPSSATVPVSNDAQPKQNPLDSLQSSFSMQPVNSQFQRTQPAANRSNASQKISPPASSPHASSGISVGLGNTNSDNSQFSWPKMKPADVQKYTKVFMEVDTDRDGKITGEQARSLFLSWRLPIDVLKKVWDLSDQDNDSMLSLKEFCFALYLMERYREGRPLPQSLPSNVLFDETLLSMMGHLKPTYGNAAWGMGQGFQPQPGMPGARPLTPAAGLSPPVQGTSPPASGTMQPNQQKSGAPVLEDSFLNPTDNGNQNILNSESKEAVSAGKTVKETENVILDSKEKMVFYRDKMQELASNSCLWVNVCYEPDGLEQVLYKSRCDNRLNEITERASADKSEAETLGKKYEEKYKQVAEIASKLTVEEAKFRDIQERKAELQQAIVKMVQGGSADGILQVRAERIQSDLDGLFNALSERCKKHGIDVKSITMVQLPAGWQPGIAEDTSLWDEDWDKFEDEGFANDLTFDTKNAYSKPAIIHEEQSFPDDHSVDSPMNANGKHENSTNGDYTVEDDSSHAHSEDDLGRSPRDSPAGKTTVESQEISNAHFGKSMEADAETHRSFDESTWGAFDNNDDVDSVWGFNPTKDSDLDHQKDFFTSGDDFGINPIRTGSRHADGTFQIKSPFTFDDSVPATPASKFGNSPRYSEAGDFFDMSSRFESFNMHESGFSPKAEPGFTRFDSISSSKDFGYNPGSLTRFDSISSSKDFGFGREVGHTRFDSISSTTGHARFDSISSTKDFDHSGAFSFDEPDPFGSTGPFKVSSQSHSPKKSSGGWSAF 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0035 1075 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 989 - -
Lal4g0035 1075 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 992 1075 - -
Lal4g0035 1075 MobiDBLite consensus disorder prediction 1045 1075 - -
Lal4g0035 1075 SUPERFAMILY EF-hand 2 79 IPR011992 -
Lal4g0035 1075 MobiDBLite consensus disorder prediction 143 159 - -
Lal4g0035 1075 MobiDBLite consensus disorder prediction 781 857 - -
Lal4g0035 1075 Pfam Cytoskeletal-regulatory complex EF hand 380 465 IPR000261 GO:0005515
Lal4g0035 1075 Coils Coil 660 680 - -
Lal4g0035 1075 ProSiteProfiles EF-hand calcium-binding domain profile. 419 454 IPR002048 GO:0005509
Lal4g0035 1075 MobiDBLite consensus disorder prediction 191 207 - -
Lal4g0035 1075 MobiDBLite consensus disorder prediction 830 844 - -
Lal4g0035 1075 Gene3D - 380 469 - -
Lal4g0035 1075 Gene3D - 1 96 - -
Lal4g0035 1075 MobiDBLite consensus disorder prediction 143 207 - -
Lal4g0035 1075 SMART eh_3 2 88 IPR000261 GO:0005515
Lal4g0035 1075 SMART eh_3 379 474 IPR000261 GO:0005515
Lal4g0035 1075 MobiDBLite consensus disorder prediction 803 826 - -
Lal4g0035 1075 SUPERFAMILY EF-hand 374 468 IPR011992 -
Lal4g0035 1075 MobiDBLite consensus disorder prediction 496 570 - -
Lal4g0035 1075 MobiDBLite consensus disorder prediction 267 380 - -
Lal4g0035 1075 ProSiteProfiles EF-hand calcium-binding domain profile. 1 34 IPR002048 GO:0005509
Lal4g0035 1075 MobiDBLite consensus disorder prediction 231 253 - -
Lal4g0035 1075 MobiDBLite consensus disorder prediction 226 380 - -
Lal4g0035 1075 MobiDBLite consensus disorder prediction 1054 1075 - -
Lal4g0035 1075 CDD EH 4 70 IPR000261 GO:0005515
Lal4g0035 1075 CDD EH 390 456 IPR000261 GO:0005515
Lal4g0035 1075 PANTHER EH DOMAIN 992 1075 - -
Lal4g0035 1075 PANTHER EH DOMAIN 1 989 - -
Lal4g0035 1075 ProSiteProfiles EH domain profile. 386 469 IPR000261 GO:0005515
Lal4g0035 1075 Pfam EF hand 5 21 IPR002048 GO:0005509
Lal4g0035 1075 ProSiteProfiles EH domain profile. 1 90 IPR000261 GO:0005515
Lal4g0035 1075 MobiDBLite consensus disorder prediction 515 565 - -
Lal4g0035 1075 SMART efh_1 37 65 IPR002048 GO:0005509
Lal4g0035 1075 SMART efh_1 3 31 IPR002048 GO:0005509
Lal4g0035 1075 SMART efh_1 423 451 IPR002048 GO:0005509
Lal4g0035 1075 SMART efh_1 389 417 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0035 Lal-Chr4 193859 203141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0035 1 1075 EF-hand Containing Proteins AT1G20760 50.729 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0035 K12472 - ccaj:109801808 1428.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0035 4 193859 203141 Lal4g0035 4 193859 203141 ECH