Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0024 ATGAACAGATCTGATATTGTGTCAGATGTTCTGTATACAATTCCTGATAACCAGGCAAAGCACTTGGCATACTTAAAAGCCACTGTTAATGAAGGAAAAGGGAGACTGAAATCATCTTCTGCTGTTGCTTTACCTGTTGAAGTTTTCCACCCTAAAGATGCACCTCCTTCCTTGACATTTTATTCCATTTCTTTACCCAAGGCCCTTCGGAAGGGAGATACTTTGAATTTGAATATATTGGCTGTTCTTACCCATATATTAGAACCATTTCCACCACACAAAATTACTCAAGCTGATATTCAGCTTCTACTGTTTCAAGATAGTGCACACTATCTTTCTCCTTATTCCGTCAACCTCCAATCACTCACTCTCAAATTGCCTTATGCAAGAATTGAGTCCTATTCAAAGCTACCAAATTATAAACTTCAAGGATCTGGGTTGAAATATGGTCCATATGAGAATCTTCCTCCTTTCTCATATTTACCACTAGTTGTTCACTTTGAGAATAATAAACCCTTTGCCGTTGCTAGAGAGGTAGTGCGAGAGATTGAGGTTTCCCATTGGGGCATTGTGCAGATCACAGAGCACTACACTCTTGTTCATGGCGGTGAACAGAGCAAAGGAGAATTTTCTAGGCTTGACTATCAGGCTAGGCCGAATGTAAGAGGTGCATCAGCATTTAGGCGTCTTGTTGCCAAGCTGCCGCCTAGAGCTCATTCTGTGTACTGCAGGGATGAAAATGGCAACATTTCCACTTCTAGTTTATGGAGTGACTCGAAAAAGACAGAACTGGAGATTGAACCTAGGTACCCAATGTTTGGTGGCTGGAAGACTGAATTTACAATTGGATATGGGTTGCCACTTCAGGACTTCCTATATGGTTCAGATGGAAAGCGCTTCCTTAATATCACTTTTGGTTCACCAATGAATGAGTTGGTGATTAACACTCTCTTTGTGAAGGTTGTTTTGCCACAGGGTTCTAATGAGATTTTGGCATCTATTCCATTTCCAGTGAAACAGTGGCAGGAGACGAAGATTTCACACATGGATGTTGCCGGTAGACCTGTTGTTGTGCTGGAGAAGAACAATGTCGTGCCTGAGCATAATGAGTATTTCCAGGTTTATTATAAGTTCAACAGTCTATCTATGCTCAGGGAGCCTCTGATGTTGATTTCCGGGTTTTTCCTTCTCTTCGTTGCCTACATTATCTACATGCGTGCAGATTTGTCAATCTCGAAGTCTTCTGCATCTTATTTGGCAAAAATCCAGTGGGAAGAGATGCAAGCAACTGTCCAGAAGGTGCATGATATCATTAGCCTTTGCTTAACAACACATGACAAGCTAGAATCATCGCTGCACGATCTTTCTAGAACAGGAGATGTTCAAGTTTGCAAAGCAACTCGAAAGTCAGTTGATAGCTTGTTGAAAGAGCTATCTAAAGAGTTGAAGTCTCTAGTATCATTTTTGCAATCTTCTCCACAAGCCTCTCACATATTACCCAAGGTGGAGGAAATGGTAGCTAAGGAGAGAGATTTGCAGGAGAGACTTATGGCAAAACACTCAACCGTTGTAGACTGCTATGAGAAAAAGTTGGGAAGAAGGGAAATTGAGAATCGGATTGCTTCGTACCAGCAGAAAATTCCATCTTTGAGACAGAAGATTGATTATCTTATGGACTTCATTGATGAGATATGA 1695 0.4112 MNRSDIVSDVLYTIPDNQAKHLAYLKATVNEGKGRLKSSSAVALPVEVFHPKDAPPSLTFYSISLPKALRKGDTLNLNILAVLTHILEPFPPHKITQADIQLLLFQDSAHYLSPYSVNLQSLTLKLPYARIESYSKLPNYKLQGSGLKYGPYENLPPFSYLPLVVHFENNKPFAVAREVVREIEVSHWGIVQITEHYTLVHGGEQSKGEFSRLDYQARPNVRGASAFRRLVAKLPPRAHSVYCRDENGNISTSSLWSDSKKTELEIEPRYPMFGGWKTEFTIGYGLPLQDFLYGSDGKRFLNITFGSPMNELVINTLFVKVVLPQGSNEILASIPFPVKQWQETKISHMDVAGRPVVVLEKNNVVPEHNEYFQVYYKFNSLSMLREPLMLISGFFLLFVAYIIYMRADLSISKSSASYLAKIQWEEMQATVQKVHDIISLCLTTHDKLESSLHDLSRTGDVQVCKATRKSVDSLLKELSKELKSLVSFLQSSPQASHILPKVEEMVAKERDLQERLMAKHSTVVDCYEKKLGRREIENRIASYQQKIPSLRQKIDYLMDFIDEI 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0024 564 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 4 542 - -
Lal4g0024 564 Pfam Ribophorin I 5 404 IPR007676 GO:0006486|GO:0016021
Lal4g0024 564 Coils Coil 533 553 - -
Lal4g0024 564 PANTHER RIBOPHORIN I 4 542 IPR007676 GO:0006486|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0024 Lal-Chr4 155533 158970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0024 4 502 Miscellaneous Gene Families AT1G76400 64.729 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0024 K12666 - gmx:100817203 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0024 4 155533 158970 Lal4g0024 4 155533 158970 ECH