LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal4g0022	ATGAAAGGTGCCATTGTAGTTGCTATCGCAGCTTCTATCGGTAATTTTCTCCAAGGATGGGATAATGCTACTATTGCTGGTGCCATTCTTTATATTAAAAAAGAGTTTGGTTTGGAAACAAGTGTGGAAGGAGTTGTAGTGGCAATGTCTCTAATAGGGGCAACAGTAATAACAACATGTTCTGGTACCATATCAGATTGGGTTGGTCGGAGACCTATGTTGATAATATCATCAATGATGTATCTGTTGAGTAGTTTGGTTATGATGTGGTCACCTAATGTTTATGTTCTTTGCTTAGCAAGGCTACTTGATGGTTTTGGTATTGGACTTGCTGTTACTCTTGTACCTGTCTATATATCTGAGACTGCCCCTTCTCATATAAGGGGTTCTCTTAATACACTTCCTCAGTTCTCTGGTTCTGCTGCCATGTTCTTATCATATTCTCTCATTTTTCTCATGTCTTTCTCTCCCTCTCTTAACTGGAGACTATTGCTTGGGTTTCTTTCTATTCCATCACTCCTTTATTTTTTATTAACTCTATTTTTCTTGCCTGAGTCTCCGAGATGGTTGGTTAGTAAAGGAAAGATGCTTCAGGCAAAAAAGGTTCTTCAAAGATTACGAGGCAGGGAAGATGTCTCAGGCGAGATGGCATTGCTGGTTGAAGGTCTCGGGATTGGAGGTGATACATCTATAGAAGAGTATGTAATAGGCCCTGTTGATGAGGAAGGGGATGGTCATGAACAAACAACGGAGAAAGATAAAATCCGATTGTATGGATCCCAAGCAGGCCTCTCTTGGTTGGCAAAACCTGTCACTGGGCAGAGTTCCCTGAGTCTTGTGTCACGCCATGGAAGCATGTCTCTAATGGATCCTCTTGTGACTCTGTTTGGTAGTGTTCATGAGAAGCTCCCTGAAACAGGAAGCATGCAAAACACCCTTTTTCCAAATTTTGGAAGTATGTTCAGCACAGCTGAGCCTCATGTTAAAACTGAACAGTGGGATGAAGAGAGCCTACAGAGAGATGGTGAGGACTACACGTCAGAGGCTGGTTCTGGGGACTCTGATGACAATTTGCAAAGTCCTTTAATATCACGTCAAACAACAAGCCTCGAAAAGGAGATACCTCTTCCTTCTGGAAGTATCCTAAGCAGCATGAGGCGTCACAATAGTCTCATACAAGGGTCAGGTGAGCCAGTTGATAGTACAGGAATTGGTGGTGGCTGGCAGCTGGCATGGAAATGGTCTGATAAAGGCGAGGGTAGTACAAAGGAAGGAGAGTTTAAAAGAATTTATTTGCACCAGGAGGGAATTCCTGGATCTCGACGTGGATCAGTTGTATCGATTCCCGGCGAAGGTGAATTTGTCCATGCTTCTGCCTTGGTAAGCCAACCTGCTCTTTACTCCAAGCAGCTTATTGGTCAGCAACCAGTCGGGCCTGCAATGGTTCACCCGTCCGAGACTTCAAAGGAATCAATTTGGAAATCTCTTCTTGAACCAGGGGTTAAGCATGCATTGATTGTCGGGATTGGAATACAATTACTTCAGCAGTTTTCGGGGATAAATGGGGTTCTATATTACACACCACAAATCCTTGAAGAGGCCGGTGTTGAGGTACTTCTTTCCAATCTAGGAATTGGCTCAGAATCAGCATCATTCCTCATCAGTGCTCTCACAACCTTGTTGATGCTTCCTTGTATAGGCTTAGCCATGAGACTCATGGATGTCTCAGGCAGAAGGCAGTTGCTACTCGTTACAATTCCAGTGCTGATAGTGTCACTCCTAATTTTGATAATTGGAAGCGCAGTAAATTTTGGGAAAGTTGTCAATGCAGCAATCTCAACTGTTTGCGTTGTGGTTTATTTCTGCACCTTTGTCATGGCTTATGGACCAATTCCAAACATCCTTTGCTCAGAGATTTTTCCGACTAGGGTTCGTGGGCTCTGCATTGCTATCTGTGCATTGGTGTTCTGGATTGCAGACATTATTGTCACATACTCACTTCCTGTGATGCTTAGTTCTATAGGACTGGCCGGTGTCTTTGCCATTTACGCTGTTGTGTGTTTCATCTCGTGGATATTTGTGTTCTTGAAGGTGCCTGAAACAAAGGGCATGCCCCTTGAAGTCATCACTGAATTCTTTGCTGTTGGTTCGAAGCAGACTGCTTCTGCCAAGAATGAGTGA	2181	0.4365	MKGAIVVAIAASIGNFLQGWDNATIAGAILYIKKEFGLETSVEGVVVAMSLIGATVITTCSGTISDWVGRRPMLIISSMMYLLSSLVMMWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSHIRGSLNTLPQFSGSAAMFLSYSLIFLMSFSPSLNWRLLLGFLSIPSLLYFLLTLFFLPESPRWLVSKGKMLQAKKVLQRLRGREDVSGEMALLVEGLGIGGDTSIEEYVIGPVDEEGDGHEQTTEKDKIRLYGSQAGLSWLAKPVTGQSSLSLVSRHGSMSLMDPLVTLFGSVHEKLPETGSMQNTLFPNFGSMFSTAEPHVKTEQWDEESLQRDGEDYTSEAGSGDSDDNLQSPLISRQTTSLEKEIPLPSGSILSSMRRHNSLIQGSGEPVDSTGIGGGWQLAWKWSDKGEGSTKEGEFKRIYLHQEGIPGSRRGSVVSIPGEGEFVHASALVSQPALYSKQLIGQQPVGPAMVHPSETSKESIWKSLLEPGVKHALIVGIGIQLLQQFSGINGVLYYTPQILEEAGVEVLLSNLGIGSESASFLISALTTLLMLPCIGLAMRLMDVSGRRQLLLVTIPVLIVSLLILIIGSAVNFGKVVNAAISTVCVVVYFCTFVMAYGPIPNILCSEIFPTRVRGLCIAICALVFWIADIIVTYSLPVMLSSIGLAGVFAIYAVVCFISWIFVFLKVPETKGMPLEVITEFFAVGSKQTASAKNE	726

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal4g0022	726	MobiDBLite	consensus disorder prediction	326	360	-	-
	Lal4g0022	726	ProSitePatterns	Sugar transport proteins signature 1.	61	78	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Lal4g0022	726	Gene3D	MFS general substrate transporter like domains	483	725	IPR036259	-
	Lal4g0022	726	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	7	702	IPR020846	GO:0022857
	Lal4g0022	726	Gene3D	MFS general substrate transporter like domains	2	262	IPR036259	-
	Lal4g0022	726	PANTHER	MONOSACCHARIDE-SENSING PROTEIN 1	1	723	-	-
	Lal4g0022	726	CDD	MFS_GLUT_like	503	700	-	-
	Lal4g0022	726	MobiDBLite	consensus disorder prediction	328	347	-	-
	Lal4g0022	726	SUPERFAMILY	MFS general substrate transporter	5	707	IPR036259	-
	Lal4g0022	726	PRINTS	Sugar transporter signature	15	25	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Lal4g0022	726	PRINTS	Sugar transporter signature	98	117	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Lal4g0022	726	PRINTS	Sugar transporter signature	515	525	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Lal4g0022	726	PRINTS	Sugar transporter signature	614	635	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Lal4g0022	726	PRINTS	Sugar transporter signature	637	649	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Lal4g0022	726	Pfam	Sugar (and other) transporter	7	218	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Lal4g0022	726	Pfam	Sugar (and other) transporter	487	713	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Lal4g0022	726	ProSitePatterns	Sugar transport proteins signature 2.	103	128	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Lal4g0022	726	PANTHER	-	1	723	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal4g0022	Lal-Chr4	148310	152025	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal4g0022	1	726	Organic Solute Cotransporters	AT4G35300	67.973	0.0	956

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal4g0022	-		-	gmx:100791976	1155.2

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal4g0022	4	148310	152025	Lal4g0022	4	148310	152025	ECH