Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0019 ATGGCGACTAAGTCCCCAGCCCCAACCACAGAGCCTCCCTCTTCCTCCGTCCAACCACCAACACAACCACCAGCACCATCCCCCGATACTAATAATATCATCACAGTCCCGAGCTACTCTCGATGGTTCTCATTCGACTCTATCAACGAATGCGAAATCCGTCACCTCCCAGAATTCTTCAATTCAAATTCATCTAAAAACCCTAAGGTTTACAAGTACTACCGCAACTCCATCGTGAAGTACTTCAGGTACAATCCCACCAGAAAAATGACCTTCACCGATCTCCGCAAAACCCTAGTCGGAGATGTGGGTTCTATCCGCAGGGTGTTCGACTTTCTGGAAACATGGGGTTTGATCAACTACCTCCCTTCTTCCTCTTCTCACAAGCCGTTGAAGTGGGATGATAAAGAGAGTAAATCGGAAAGTGGATCCATTTCCAATGATTCCTCTTCAGCTCCAGTTGTTAAGGTTACCACCAAGAGAGTTTGTAGTGGCTGCAAAGCCCTATGTACTATTGCTTGCTTTGCTTGTGATAAGTATGATTTGACTCTTTGTGCGAGATGTTATGTTCGGGGAAATTATCGAGTTGGTGTAAGTTCTTCAGATTTTAGGCGGGTGGAGATAAGTGAGGAGACAAAGACAGATTGGTCTGAGAAGGAAAGCCTGCGTCTTCTGGAAGCTATTACACATTATGGTGATGACTGGAGGAGTGTTTGTCAGCATGTTGGTGGCAGGACTGAGAAGGATTGTGTTTCTCATTTTCTGAAGCTTCCTTTTGGGGATCAATTCTTACAAGTTCAAGACTCTGCTGTGAGTAATAATCAATTAACACAACTTGCTCATGCTCAATGTGACAGGGAAACTGTTGCCTCCTCGGAGTCTAGTAAGAGGATGCGTCTAACACCTCTTGCTGATGCAAGCAATCCTATCATGGCTCAGGCTGCTTTCCTGTCAGCTTTGGCAGGATTGGAGGCTTCACAAGCTGCTGCTCAAGCTGCAGTGACAACTCTGTCCGATGTTTACAAAGCAACTCGAGTAAATCATCGGTCATTTCCAAGGAATAGATTACTGCAAGATGCTGGTATTGCCTTTAACGGTATTAATACTTCAGATTCTCATATTGCATCTCGGTTGCATGGAAATGTACAGCTTGAGAAGGAAGAGTCGGATGTGGAAAAATCAATTTCTGAGATTATAGTTCAGATGAAAAATATGGAAGACAGGATTATGCAATTTGAAGATTTAGACCTGGTGATGGAGAAAGAACGGCAGCAGTTGCAGCAAACGAAGAATATGCATTTCCTTGATCAGCTTACTCTTCTATTTCATAAACAAGCAGCAGCAAAAACTGGAGAGTGCACTAATGTAAAGACAAATAGTTGA 1383 0.4375 MATKSPAPTTEPPSSSVQPPTQPPAPSPDTNNIITVPSYSRWFSFDSINECEIRHLPEFFNSNSSKNPKVYKYYRNSIVKYFRYNPTRKMTFTDLRKTLVGDVGSIRRVFDFLETWGLINYLPSSSSHKPLKWDDKESKSESGSISNDSSSAPVVKVTTKRVCSGCKALCTIACFACDKYDLTLCARCYVRGNYRVGVSSSDFRRVEISEETKTDWSEKESLRLLEAITHYGDDWRSVCQHVGGRTEKDCVSHFLKLPFGDQFLQVQDSAVSNNQLTQLAHAQCDRETVASSESSKRMRLTPLADASNPIMAQAAFLSALAGLEASQAAAQAAVTTLSDVYKATRVNHRSFPRNRLLQDAGIAFNGINTSDSHIASRLHGNVQLEKEESDVEKSISEIIVQMKNMEDRIMQFEDLDLVMEKERQQLQQTKNMHFLDQLTLLFHKQAAAKTGECTNVKTNS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0019 460 SUPERFAMILY Homeodomain-like 212 262 IPR009057 -
Lal4g0019 460 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 213 257 IPR017930 -
Lal4g0019 460 ProSiteProfiles Myb-like domain profile. 208 258 IPR001005 -
Lal4g0019 460 Pfam SWIRM domain 37 121 IPR007526 GO:0005515
Lal4g0019 460 SUPERFAMILY Homeodomain-like 32 127 IPR009057 -
Lal4g0019 460 ProSiteProfiles SWIRM domain profile. 34 130 IPR007526 GO:0005515
Lal4g0019 460 MobiDBLite consensus disorder prediction 12 27 - -
Lal4g0019 460 Gene3D - 211 261 - -
Lal4g0019 460 PANTHER SWI/SNF COMPLEX-RELATED 6 453 - -
Lal4g0019 460 CDD SANT 216 257 IPR001005 -
Lal4g0019 460 Gene3D - 40 124 IPR036388 -
Lal4g0019 460 MobiDBLite consensus disorder prediction 1 31 - -
Lal4g0019 460 Pfam Myb-like DNA-binding domain 214 257 IPR001005 -
Lal4g0019 460 SMART sant 212 260 IPR001005 -
Lal4g0019 460 ProSiteProfiles SANT domain profile. 211 262 IPR017884 -
Lal4g0019 460 Coils Coil 395 432 - -
Lal4g0019 460 MobiDBLite consensus disorder prediction 128 151 - -
Lal4g0019 460 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3B 6 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0019 Lal-Chr4 128575 131219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0019 168 254 EF-hand Containing Proteins AT3G07740 35.294 3.38e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0019 K11649 - gmx:100779777 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0019 4 128575 131219 Lal4g0019 4 128575 131219 ECH