Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1571 ATGGCGATGACCCTTTTTACCCATTCCCCTGAATTTTCCACTCCCCCTAAAATTGTGCACAATTGTAAACTTCATCAAAACCCTAGTTTGAGAAAAGTTCAGAGCTTTAAACCCTTTAGTAATAGTAAGGCAATTGGGTCAAGTAAGGTTTTTAGTTGCAAATTGAAGGATTTTGGGGTTTTGGGTTTGGATCAGAATTTGAGATTGTATGGTCAATTCTCGGTTACGGTGAAGGAAGAGAGCAGAGAAGAGAAAGAGAGGCAGAATTACTATGTGAACATGGGTTATGCAATCCGTACTGTTAGGGAGGATTTTCCTCAATTGTTCTGCAGGGAGCCTAGATTTGATATTTACAGGGATGATATTGTATTCAAAGATCCTTTGAACACATTCATTGGCGTGGAGAATTACAAATCAATCTTCTGGGCACTACGATTTCAAGGAAGGATATTTTTCAAAGCTTTGTGGATTGACTTAACTAGTGTGTGGCAGCCTGCTGAGAATGTCGTTATGGTTCGCTGGACCATTCATGGAATTCCACGAGTTCCATGGGAGAGTCGCGGTAGGTTTGATGGAACTTCAGAGTATAAACTTGACAAGGAAGGGAAGATTTACGAACACCAGGTTGACAACATTGCAACGAACAAACCTCATAGGTTTAATGTGCTCAGTGTGGAAGAATTGGTTCAGTCTATTAGCTGCCCCTCAACTCCCAGACCAACTTATTTTGAAATATCAACATCTACAGAGAGAACTTGA 759 0.4058 MAMTLFTHSPEFSTPPKIVHNCKLHQNPSLRKVQSFKPFSNSKAIGSSKVFSCKLKDFGVLGLDQNLRLYGQFSVTVKEESREEKERQNYYVNMGYAIRTVREDFPQLFCREPRFDIYRDDIVFKDPLNTFIGVENYKSIFWALRFQGRIFFKALWIDLTSVWQPAENVVMVRWTIHGIPRVPWESRGRFDGTSEYKLDKEGKIYEHQVDNIATNKPHRFNVLSVEELVQSISCPSTPRPTYFEISTSTERT 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1571 252 Pfam Uncharacterized conserved protein (DUF2358) 97 207 IPR018790 -
Lal3g1571 252 PANTHER - 8 251 - -
Lal3g1571 252 SUPERFAMILY NTF2-like 115 208 IPR032710 -
Lal3g1571 252 Gene3D - 115 214 - -
Lal3g1571 252 PANTHER RIKEN CDNA 2310061I04 GENE 8 251 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1571 Lal-Chr3 21476786 21479234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1571 - - vra:106773181 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1571 3 21476786 21479234 Lal3g1571 3 21476786 21479234 ECH
Lal3g1571 3 21476786 21479234 Lal18g0261 18 2172936 2175258 LSH
Lal3g1571 3 21476786 21479234 Lal18g0261 18 2172936 2175258 PCT
Lal18g0261 18 2172936 2175258 Lal3g1571 3 21476786 21479234 PCT