Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1427 ATGTCACTGTCTCTTTCTTCAACTTCTGTGTCGTTCTCAAAATCTTCGTTCACAAGACCAATCCATCATTGTAACCGAATCAATAGTTTATCTAAGAGTTTGAATGTTGGAGGTGATAGTTTATGTCAAAGATTTCGTGTATTGAAACTGTGGATAGTTGAGAGGTTCAATTTTGAACCAATAATGCAGTTTAAGAGATCAACAAATCACTTCAAGAATAGTTTGGGATCAGAGTTATCAAATGGAATAGGATCGTTGTTTTCTGATGAAAAAGTTATTTCCGGGGAGTCTTCATCGTTGCTGAAAACAAGTTCCTCAAGCTCTTTCGTGGATGATAGTAGAGGACCCTCACTTTCCATTATTATCATTGGAGCTACTGGTGAGCTGGCTAGGAGCAAGATTTTTCCAGCTTTATTTGCTCTGTACTACAGTGGCTTCCTTCCCGAGAATGTAGCCATTTTTGGGTATTCAAGGAAGAATATGACTGATGAAGACCTGCGATCCATTATAGCTTCAACGTTAACATGCCGAGTTGATCATCAACAGAATTGTGGCGACAAAATAGATGCTTTCCTTCGTAGAACATACTACATTAATGGGGGCTATGACAATATATCTGGAATATCCTTGCTGAATGCCCGAATGGAGCAGATCGAGGGAAGATCCAGAGCCAACCGGATATTCTACCTTTCTGTGCCGCAAGAAGCACTTTTGGACATCGCATCATGTCTTGCTAGCGGTGCTCAGACAAAAAAAGGATGGAATCGTATAATAATTGAGAAGCCGTTTGGCTTTGATGCACTCTCTTCCCATAGGCTGACCCAATCTCTTCTCTTGAAGTTTGAGGAAAAGCAAATATACAGGATTGATCATCTTCTGGGAAGGAATCTCATTGAGAATCTCACGGTTTTAAGGTTTGCAAATCTAGTGTTTGAGCCACTTTGGAGCCGTACTTACATTGATAATATACAGGTCGTATTATCAGAAGATTTAGCCGTGCATCCAGGAAGGTATTTTAGTGGCTATGGAATTATCCGTGATATTGTTCACAGTCATGTGCTCCAAACAATTGCATTGCTTGCCATGGAACCACCCATAAGCCTTGATGGAGAAGATATTCGGAATGAAAAGGTCAAGGTTTTGAGGTCGATTCGCAAATTGAAGCCTAAAGATGTCATTCTCGGCCAGTATAAAGGAAGTAGTGGACAGAAGGTTGATGTGAGCTTAAATGGTCTGGCACCTACTTATTTCGCAGCTGCACTCTACATTGACAATGCGCGATGGGATGGCGTGCCATTTTTGGTTAAGACAGGCTTGGGCCTCATGAATCACCAGATGGAGATACGGATTCAATTCCGTCATGTTCCAGGAAACGTTTACCATGAGAAAATCGGGCATAATTTTGAACGTGCCACAAATGAGCTCATTCTCCGTGATGTTCCTGATGAAGCTATTCTAGTGAGAGTTAACAATAAGGTTCCAGGATTGGGGTTAAAGCTTGACTCTTCAGAGTTAAATTTGCTTTACAAGGACAAGTACAACATGGAGGTACCAGATTCATATGAGCATCTTCTACTTGATGTCATAGATGGAGATAACCACCTTTTTATGAGAAGTGATGAACTTGCAGCTGCATGGAACATTCTAACTCCAATTTTGAATGAGATGGACAAGGACAATATATCACTAGAGCTTTATGAGCTAGGCGGTCGTGGTCCGGTTGGAGCATACTATCTCTGGGCAAAACACGGTGTCCGGTGGGTGGAGGACTAG 1773 0.4157 MSLSLSSTSVSFSKSSFTRPIHHCNRINSLSKSLNVGGDSLCQRFRVLKLWIVERFNFEPIMQFKRSTNHFKNSLGSELSNGIGSLFSDEKVISGESSSLLKTSSSSSFVDDSRGPSLSIIIIGATGELARSKIFPALFALYYSGFLPENVAIFGYSRKNMTDEDLRSIIASTLTCRVDHQQNCGDKIDAFLRRTYYINGGYDNISGISLLNARMEQIEGRSRANRIFYLSVPQEALLDIASCLASGAQTKKGWNRIIIEKPFGFDALSSHRLTQSLLLKFEEKQIYRIDHLLGRNLIENLTVLRFANLVFEPLWSRTYIDNIQVVLSEDLAVHPGRYFSGYGIIRDIVHSHVLQTIALLAMEPPISLDGEDIRNEKVKVLRSIRKLKPKDVILGQYKGSSGQKVDVSLNGLAPTYFAAALYIDNARWDGVPFLVKTGLGLMNHQMEIRIQFRHVPGNVYHEKIGHNFERATNELILRDVPDEAILVRVNNKVPGLGLKLDSSELNLLYKDKYNMEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWNILTPILNEMDKDNISLELYELGGRGPVGAYYLWAKHGVRWVED 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1427 590 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 94 590 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal3g1427 590 PANTHER INACTIVE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 4, CHLOROPLASTIC 94 590 - -
Lal3g1427 590 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 119 588 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal3g1427 590 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 303 587 IPR022675 GO:0004345|GO:0006006|GO:0050661
Lal3g1427 590 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 116 303 IPR036291 -
Lal3g1427 590 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 121 300 IPR022674 GO:0006006|GO:0016614|GO:0050661
Lal3g1427 590 Gene3D Dihydrodipicolinate Reductase; domain 2 289 589 - -
Lal3g1427 590 PRINTS Glucose-6-phosphate dehydrogenase signature 256 269 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal3g1427 590 PRINTS Glucose-6-phosphate dehydrogenase signature 280 308 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal3g1427 590 PRINTS Glucose-6-phosphate dehydrogenase signature 331 348 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal3g1427 590 PRINTS Glucose-6-phosphate dehydrogenase signature 349 365 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal3g1427 590 PRINTS Glucose-6-phosphate dehydrogenase signature 427 453 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal3g1427 590 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 117 589 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal3g1427 590 Gene3D - 115 288 - -
Lal3g1427 590 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 290 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1427 Lal-Chr3 20203010 20208232 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1427 K00036 - gmx:100796541 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1427 3 20203010 20208232 Lal3g1427 3 20203010 20208232 ECH