Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1390 ATGTCACTCACACTCGCACATGCTTTTCCTCTCTTACTATTCATCATTTCAACTCTTTCCTTTTCACTCGCTTCCGCTGATTCGTTCTACGGTTGCGGTGGATTTATCGAGGCGAGTTCATCGTTGATAAAGTCGAGGAAAAAAACCGATTCTAAATTGGATTATTCTCATGTCACGGTCGAGCTTCAAACGATTGATGGACTGGTAAAGGATAGCACACAATGTGCTCCAAATGGATACTATTTTATTCCAGTGTATGACAAGGGTTCCTTTGTAATTAAAGTCAATGGGCCTGAAGGATGGTCATGGGATCCAGAAAAGGTTCCCGTGGTGGTTGACAATAACGGTTGCAATGGCAATGAGGATATAAATTTCCGTTTCACAGGGTTCACTATATCTGGTAAAGTTGTGGGAGCTGTGGGTGGAGGAAGTTGTTCAGTTAAAAATGGAGGTCCTTCAAATATAAAAGTTGAACTATTGTCTCCTGCTGGGGATCTCCTCTCTTCTGTCCTAACTTCACAATCTGGGAGTTACTTGTTTACAAATATAATTCCAGGAAAATATGAATTGCGTGCTTCAAATCCTGATATAAAAGTTGAAGTTAAAGGTTCAACACAGGTGGAATTGGGCTTTGGAAATGTGGTAGTTGATGATGTTCTCTTTGTCCCTGGGTATAGTATCGATGGGCTTGTTGTTTCCCAGGGAAATCCAATACTAGGAGTCCAAATTTTTTTATATTCAGATGATGTTTCTGAGGTAGAATGTTTGCAAGGTTCAGCTGATGGCCCAAGACAAGGAGCAGCCCTCTGCCACGCTGTCTCAGGTGCTGATGGAAAGTTCACATTCAATTCCATACCTTGTGGAAGTTATGAACTTGTGCCCTACTATAAGGGTGAAAATACAGTATTTGATGTTTTGCCATCCAGTGTCTCAGTTAATGTTAAGCATCAACATGTAAAGGTGCTTCAGAAATTTCAGATAACTGGATTTTCCATTGGAGGCCGGGTAGTTGATGGAAATGAAGTGGGAGTGGAGGGTGTTAAAATCATAGTGGATGGTCATGAAAGGTCTATTACTGACAATAAAGGATATTATAAACTTGATCAGGTTACATCCAAGCGCTATACCATAGAGGCCAGAAAGGAGCATTACAATTTCAAGAAGTTGGAGAAGTATATGGTCTTGCCAAATATGGCTTCAGTAGAAGACATTAATGCTATTTCATATGATATTTGTGGTTCAGTTCGGATGGTTGGTGCTGGTCTGAAAGCAAAGGTGGCTTTGACTCATGGACCTGAGAATGTAAAACCACAAAGGAAACTAACAGATGGAAATGGAAACTTCTGCTTTGAGGTTCTGCCTGGTGAATATCGCGTATCAGCCATTGCTGCTAGTCCCGAGAATGCTCATGGACTCATGTTTGTGCCATCTTATATCGATGTTGTGGTCAACAGTCCCTTGTTGAATGTTCAATTTTCACAGGCTCTGGTCAATATTCACGGTGCTGTAGCCTGCAAGGAGAAATGTGGTCCTTCTGTATCCATGACTCTTGTGAAACAGGCTAATAAACATAATGAAGAGATAAAGACGATTCGCTTGACCACCGAGAGTAGTGAATTTCATTTTTCGGATGTTATTCCTGGAAAATACAGGCTTGAGGTCAAACATGGTTCTCCTGATTCAGTGACCTTGGAAGATAACTGGTGCTGGAAGCAGAGCTTCATTGATATAAATGTTGGAGCTGAGGACTTTGATGGAGTTTTGTTTGTTCAGAAAGGCTACTTGGTCAATGTGATCTCCACTCATGATGTTAATGGTTTCATAACTCAACCAGATGGGTCAACTGTGAATTTGAAGATTCAGAAAGGTTCCCAGCATATATGTGTAGAATATCCTGGAGTACATGAGTTTAATTTTGTTGACTCTTGCATCTTATTTGGGAGCTCATCTGTGAAAATTGATACATCTAATCTATCGCCCATCCATCTAAGAGGAGAAAAATATCTACTTAAAGGACAAATAAGCTTGCAGTCCAGCTCACTTAATGCATTGCCTGAGAATATAGTTGTCGATATTCAAAAGGATGGAGGTGGTATTATTGACTCTTCTAAGGCCGTGCTTAAATCTCATGAGAAAGATCAAACAAATACTGCTATATTCGAGTATTCTTTTTGGGCAAATCTTGGACAAAAGCTTACATTCGTTCCACGGGACTCAAGGAATGATGGGGAGAAGAAAATTTTATTTTATCCTAGAGAACACCATGTAATTGTGGCAGATGATAATTGTCAAGCTTTTGTTACTGCATTTTCTAGTCGACTGGGAGTATACATTGAAGGAGCAGTTTTGCCTCCTCTTTCTGGTGTTGATATCAGGATTTTTGCTGCTGGAGATAGCAGCATCACCTCATTTAAAAGTGGTGAATTAGTACTTGAAACGACCACTGGTACTGATGGCTCCTACGTGGCAGGTCCTCTGTATGATGATATTGGTTACAGTATTGAGGCTGTAAAGCCTGGTTATCATTTAAAACAAGTGGGCCCTCATTCCTTTAGCTGCCAGAAGCTTAGTCAAATTTCAGTACGCGTACATCACATAGATGATGCTAAAGAATCCATTCCTTCTGTTTTGTTATCTTTGAGTGGTGATAATGGTTATCGAAACAACTCAGTATCTGGGACCGGAGAGACATTCTCATTTATTAATTTATTTCCTGGAATGTTCTATTTACGGCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCAGCAAAGGCAATCGAGCTTGGAGCGGGAGAGTCTAAAGAAGTAATTTTCCAGGCCACACGCGTAGCTTACAGTGCTACAGGCTTAGTCACTCTGTTGTCTGGCGAACCCAAAGGAGGAGTTTCAGTTGAAGCCCGGGCAGAGTCAAAAGGCTATTTTGAGGAAACTGTGACTGATTCCTCTGGAAATTATCGTCTAAGAGGACTACATCCTGATACTGTCTATTTTGTTAAAGTATCTAAGAGGGATGTCTTGGGCAATTCTAATATAGAGCGTGCATCTCCAGATTCTGTTGCTGTCAAGGTTGGAACTGAGGATATTAAGGGTTTAGATTTTATAGTTTTTGAGGAGCCAGAAATAACAATTGTAAGTTGCCACATCGAAGGAAACACAACAGATGAACTACGTAAACATATAATGGTAGAGATCAAGTCAGCTAGTGACACGACGAAGATTGAATCCGTCTTCCCCCTGCCGATCTCTAACTTCTTCCAAGTGAAAGGTTTATCTAAGGGCAGACATCTTCTACAACTTAGATCTGGTTTCCCTTCAAGCTCCCTTAAATTTGAATCTGATGTCATTGAGGTTGACTTGGAGAAAAATATTCAAATCCATGTCGGCCCACTAAGATACAGGATTGTTGAAGATCAGCTGAAGCAGGAGCTGACTCCAGCACCAATATTAACTCTTGTAGGTGGATTTCTATTTATTGCACTTGTTCTCAGCATCCCAAAATTGAAGGATTTGTATGAAGCCACAGTAGATATACCCACACCAGGATTTTCATCAACATCAAGAAAAGATGTGAAGAAGCCAATTTTGAGAAAGAAGACATACTAA 3603 0.4052 MSLTLAHAFPLLLFIISTLSFSLASADSFYGCGGFIEASSSLIKSRKKTDSKLDYSHVTVELQTIDGLVKDSTQCAPNGYYFIPVYDKGSFVIKVNGPEGWSWDPEKVPVVVDNNGCNGNEDINFRFTGFTISGKVVGAVGGGSCSVKNGGPSNIKVELLSPAGDLLSSVLTSQSGSYLFTNIIPGKYELRASNPDIKVEVKGSTQVELGFGNVVVDDVLFVPGYSIDGLVVSQGNPILGVQIFLYSDDVSEVECLQGSADGPRQGAALCHAVSGADGKFTFNSIPCGSYELVPYYKGENTVFDVLPSSVSVNVKHQHVKVLQKFQITGFSIGGRVVDGNEVGVEGVKIIVDGHERSITDNKGYYKLDQVTSKRYTIEARKEHYNFKKLEKYMVLPNMASVEDINAISYDICGSVRMVGAGLKAKVALTHGPENVKPQRKLTDGNGNFCFEVLPGEYRVSAIAASPENAHGLMFVPSYIDVVVNSPLLNVQFSQALVNIHGAVACKEKCGPSVSMTLVKQANKHNEEIKTIRLTTESSEFHFSDVIPGKYRLEVKHGSPDSVTLEDNWCWKQSFIDINVGAEDFDGVLFVQKGYLVNVISTHDVNGFITQPDGSTVNLKIQKGSQHICVEYPGVHEFNFVDSCILFGSSSVKIDTSNLSPIHLRGEKYLLKGQISLQSSSLNALPENIVVDIQKDGGGIIDSSKAVLKSHEKDQTNTAIFEYSFWANLGQKLTFVPRDSRNDGEKKILFYPREHHVIVADDNCQAFVTAFSSRLGVYIEGAVLPPLSGVDIRIFAAGDSSITSFKSGELVLETTTGTDGSYVAGPLYDDIGYSIEAVKPGYHLKQVGPHSFSCQKLSQISVRVHHIDDAKESIPSVLLSLSGDNGYRNNSVSGTGETFSFINLFPGMFYLRPVLKEYAFSPPAKAIELGAGESKEVIFQATRVAYSATGLVTLLSGEPKGGVSVEARAESKGYFEETVTDSSGNYRLRGLHPDTVYFVKVSKRDVLGNSNIERASPDSVAVKVGTEDIKGLDFIVFEEPEITIVSCHIEGNTTDELRKHIMVEIKSASDTTKIESVFPLPISNFFQVKGLSKGRHLLQLRSGFPSSSLKFESDVIEVDLEKNIQIHVGPLRYRIVEDQLKQELTPAPILTLVGGFLFIALVLSIPKLKDLYEATVDIPTPGFSSTSRKDVKKPILRKKTY 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1390 1200 Gene3D - 332 409 - -
Lal3g1390 1200 Gene3D Immunoglobulins 143 217 IPR013783 -
Lal3g1390 1200 SUPERFAMILY Hypothetical protein PA1324 119 196 - -
Lal3g1390 1200 SUPERFAMILY Starch-binding domain-like 221 305 IPR013784 GO:0030246
Lal3g1390 1200 SUPERFAMILY Starch-binding domain-like 945 1005 IPR013784 GO:0030246
Lal3g1390 1200 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 11 1192 - -
Lal3g1390 1200 PANTHER NODAL MODULATOR 1-RELATED 11 1192 - -
Lal3g1390 1200 SUPERFAMILY Carboxypeptidase regulatory domain-like 330 396 IPR008969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1390 Lal-Chr3 19811901 19826307 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1390 - - ccaj:109814730 1989.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1390 3 19811901 19826307 Lal3g1390 3 19811901 19826307 ECH