Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1368 ATGGGAAACCATATCTCATTTCATCCATCAAAACCCACTGGCAAAATAGTTTACTATGATGGATCAGTTCAAGAATTTGACCAACCATTAACTGTTGCAGAACTCATGTTGGAGCACCCACAACAAGTAGTGGTTGAGTTCCATTCAACAATGAACCAAAAAAAGCCACCAATTCCATTACCTGCAGACAATAACCTAGAGATGAAAAAGATATACCTAATGCTTCCATTGAAGCAAGGAAAGCCTGTAGGGTTGCACCACATACTCTTCATTGTTAATTCTTCTTTGCATTCCAAGTATCTCATGTCTTCTTCAGGGTTTCTTCCTTGGCTTGCAAGGCTGTGCCATAATAGTAGAATAATTGGAGATGATAATAAAGTATTGAAAAGAAAGGAAGGAATAGAGAATAGAGAAGAAAGTTGTGATTTTTCTGAGTATTTAGAAGAAATGGTTGAAGGGAGGCCTGAATATTTGAGTAGACAGTTATCAGGGAAAGGGTGGAAACCTAGCTTGGACACTATTAAAGAGAAGAAGATTAAGAAGAAACTATCTCACTGGTTTTTCCATCATAAGTTTATAGAGGTCTAA 588 0.3707 MGNHISFHPSKPTGKIVYYDGSVQEFDQPLTVAELMLEHPQQVVVEFHSTMNQKKPPIPLPADNNLEMKKIYLMLPLKQGKPVGLHHILFIVNSSLHSKYLMSSSGFLPWLARLCHNSRIIGDDNKVLKRKEGIENREESCDFSEYLEEMVEGRPEYLSRQLSGKGWKPSLDTIKEKKIKKKLSHWFFHHKFIEV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1368 195 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 185 - -
Lal3g1368 195 Pfam PADRE domain 1 176 IPR025322 -
Lal3g1368 195 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1368 Lal-Chr3 19485899 19486486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1368 - - var:108328709 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1368 3 19485899 19486486 Lal3g1368 3 19485899 19486486 ECH
Lal3g1368 3 19485899 19486486 Lal13g0526 13 3412618 3413160 PCT
Lal13g0526 13 3412618 3413160 Lal3g1368 3 19485899 19486486 PCT