Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1346 ATGGCGTCAGGTTGGGGAATCAACGGTAACAAAGGCCGTTGTTACGATTTCTGGATTGATTTCAGTGAATGCATGTCTCGTTGCAGAGAACCCAAAGATTGTTCTCTCCTTCGTGAAGATTACCTTGAATGTCTTCACCACTCCAAAGAGTTCAAACGAAGAAACCGGATTTACAAGGAGGAGCAGCGCAAACTAAGAGCTGCTGCTAGGAAAGACCATGATGATGGGGTTGGTAATGAACATCATTAG 249 0.4458 MASGWGINGNKGRCYDFWIDFSECMSRCREPKDCSLLREDYLECLHHSKEFKRRNRIYKEEQRKLRAAARKDHDDGVGNEHH 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1346 82 Pfam NADH:ubiquinone oxidoreductase, NDUFS5-15kDa 12 64 IPR019342 -
Lal3g1346 82 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 5 1 74 IPR019342 -
Lal3g1346 82 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 11 52 - -
Lal3g1346 82 PANTHER BNAC04G00180D PROTEIN 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1346 Lal-Chr3 19271220 19274616 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1346 K03938 - gmx:100306303 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1346 3 19271220 19274616 Lal18g0427 18 3576144 3578084 LSH