Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1343 ATGAGTCGTCATCCAGAGGTTAAGTGGGCTCAAAGGGTTGAGAAGGTGTATATCACAGTTCAATTGGCGGATTCAAAAGATGCTAAAGTGGATCTTACTCCAGATGGTGTTTTTACCTTTTCTGCCAGTGCTGGTGCTGGTGACAATCAGTATGAGCTTAAACTGGAGCTCTTTGACAAGGTTAATGTAGAGGAGAGCAAAATCAATGTAGGAATGCGGAGCATATTCTGTGTAGTGCAGAAAGCAGAAAGTGAATGGTGGAAAAGGTTACTGCGTGCAGAAGGCAAAGCTCCACATTATGTGAAAGTGGATTGGGATAAATGGGTTGATGAGGATGAGAATGAGGGGGGTGAACCGGACTTGGGAGGCATGGATTTCTCAAAATTTGGTGGGATGGGTGATGATGCAATGGGGGGACTTGGAGGAATGGGAGGAATGGGGGGACTTGGAGGAATGGGAGGAATGGGGGGACTTGGAGGAATGGGAGGAATGGGGGGACTTGGAGGAATGGGAGGAATGGGAGGAATGGGGGGACTTGGAGGAATGGGAGGAATGGGAGGAATGGGGGGACTTGGAGGAATGGATTTCTCAAAACTTGCTGGGATGGGTGGTGATGCAATGGGAGGGATGGATTTCTCTAAATTTGGTGGGATGGGTGATGATGCAATTGGTGATGATATTAATGGAAGTGATGATGAAGGGCAAGAAGTGTCAAAGGCTGGAGAAGAAGATGCTGGCAAGAGTACTGCTGGTGAAACATCTACAGATAAACAAGAAGCTGCTCCAAGCACAACATGA 798 0.4749 MSRHPEVKWAQRVEKVYITVQLADSKDAKVDLTPDGVFTFSASAGAGDNQYELKLELFDKVNVEESKINVGMRSIFCVVQKAESEWWKRLLRAEGKAPHYVKVDWDKWVDEDENEGGEPDLGGMDFSKFGGMGDDAMGGLGGMGGMGGLGGMGGMGGLGGMGGMGGLGGMGGMGGMGGLGGMGGMGGMGGLGGMDFSKLAGMGGDAMGGMDFSKFGGMGDDAIGDDINGSDDEGQEVSKAGEEDAGKSTAGETSTDKQEAAPSTT 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1343 265 Gene3D - 2 121 IPR008978 -
Lal3g1343 265 ProSiteProfiles CS domain profile. 2 91 IPR007052 -
Lal3g1343 265 SUPERFAMILY HSP20-like chaperones 1 140 IPR008978 -
Lal3g1343 265 MobiDBLite consensus disorder prediction 232 250 - -
Lal3g1343 265 Pfam CS domain 6 81 IPR007052 -
Lal3g1343 265 MobiDBLite consensus disorder prediction 221 265 - -
Lal3g1343 265 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 1 134 IPR045250 GO:0051879
Lal3g1343 265 PANTHER EXPRESSED PROTEIN 1 134 - -
Lal3g1343 265 CDD p23_hB-ind1_like 5 113 - -
Lal3g1343 265 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1343 Lal-Chr3 19213163 19217173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1343 - K15730 lang:109345990 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1343 3 19213163 19217173 Lal3g1343 3 19213163 19217173 ECH
Lal3g1343 3 19213163 19217173 Lal5g0266 5 2324070 2327538 LSH
Lal3g1343 3 19213163 19217173 Lal18g0428 18 3580614 3583972 LSH