Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1342 ATGGCTTCCAATGCCATCAAACAACGTGATCCTACCACCACCACCACCACCATGAACAACAAGAGAAGAAGTGGTGGTGGAAGTAGAAGAGACAAGAGAATGGTTATGGCCAAACATGGCTTTAGGTCACTTGCTATAGCAGTTTCTCTTCCTTTATCTCTTACCCTTATATCCATGTATCTAGGTTTATCTCTTCATACTCAACAACATGCTCATCACGATGATGCTTCTAGAAAGCCCTTTTGGTTCCCACCTTCTTGGGTATTACACCTTTTGTGTCCAGCTTCAAGTTTCTTGATGGGTATATCTGCATGGATGGTTTGGGCAAATGGAGGGTTCCATAGAAACCCTGTGGCTCTTATGCTTTATTTGACTCAGATAATGTTCACTGTGCTATGGGATCCTCTTGTTTTTGGTTTTGGGACAATAAGGGTTGGCTTCATAGTGTGTTTGGGAATGTTTGTAGCATTGTTTGGGTGCATGCATGTGTTTGGGAAGGTTAATTCTGTTGCTGCTGATTTGGTAAAACCTTGTTTAGCATGGATTGCTTTTCTATCTATTGTAAATCTTAAGCTAGTTTACCTTTAA 588 0.4099 MASNAIKQRDPTTTTTTMNNKRRSGGGSRRDKRMVMAKHGFRSLAIAVSLPLSLTLISMYLGLSLHTQQHAHHDDASRKPFWFPPSWVLHLLCPASSFLMGISAWMVWANGGFHRNPVALMLYLTQIMFTVLWDPLVFGFGTIRVGFIVCLGMFVALFGCMHVFGKVNSVAADLVKPCLAWIAFLSIVNLKLVYL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1342 195 Pfam TspO/MBR family 68 194 IPR004307 GO:0016021
Lal3g1342 195 MobiDBLite consensus disorder prediction 1 31 - -
Lal3g1342 195 PANTHER TSPO/MBR FAMILY PROTEIN 28 194 - -
Lal3g1342 195 PIRSF PBR 33 195 IPR004307 GO:0016021
Lal3g1342 195 CDD TSPO_MBR 78 193 IPR004307 GO:0016021
Lal3g1342 195 Gene3D TspO/MBR protein 40 195 IPR038330 -
Lal3g1342 195 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 28 194 IPR004307 GO:0016021
Lal3g1342 195 MobiDBLite consensus disorder prediction 1 23 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1342 K05770 - gmx:100785785 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1342 3 19210653 19211240 Lal3g1342 3 19210653 19211240 ECH