Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1335 ATGAATTCTGTTTGCTATGATGACAACAAAGAAGACAAATCTGGTGAAGGATCATCTAGTGTTGAAGTGGATGATGATATACTTGGAGATTGGGAAAAAGTACCTCGAATCGGAGACGAATACCAAGCAAAAATTCCTTCATTAGTTGAAGCAATTTATCTTCCTAAGCCAGAATTGCCAAGTCCTCTTGTGCAGGCACAATGTGTAACTGAAAATAGTTGTGGAATGTTAGAATCTTTCATAAGTGAAGAGGGGCAAGTTATTTCTTATGAGAATGCTTTACTTGTTGGTGAAGGAAAAAATGTGGAGAAGGTTTCAAATTTTCAATCCTCTTCTAAATGTAATGAGACATGTATTATTGTTTCATACCCTGAAATGAAAACTGAAATGGATCAATCAGGAGGCAAGGATCTTCTTGTACATGGTTTTTCGGTTGATCAATCATGGACGGATTTCGAATATAACCGGTTTCTCCTTTGCCTCTATGTATTTGGGAAGAAGAACTTCAAATTTGTAAAGAAATTTGTTGGGGGTAAAAATATGGGAGACATAATGTCTTTCTACTATGGAAAGTTCTATAGGTCTAAAGGATATCGCCGATGGTCAGTGTCCCGGAAGTTGAGATCTAAGCGGTATATATGCGGCAAGAAAATGTTCACAGAATGGAGACAACAAGAATTGCTGTCAAGATTATTTCCTCATGTGTCAGGGGAGTGTCAAACTATGTTGGTTGAGGGGCGTCCCAGTGCACGAGGCTCCCACTTAGTGGGATCTGAGATGGTAGATGTACGCAGCCTTATCCCCATTTCGAGGAATTTTGCAGAGGACAGGATGGCATTTGTGGAATATATATTTGCTTTAAAGGATGCAGTTGGTATTGACTTGCTTGTAGATGCAGTAGGTATTGGCAAAGGGAAGCAAGATCTCACTAGCACTGCTGTTGAGCAAACAAGGACCGGTGATATCTTCTCTCTTCGGCCGAAAATACCGATTACCAAAGCTCGCTCCTCTCTTACACCACCAGATATAATCAAGTTTCTTAACGGAAACTTTAGATTGAGTAAATCTAGATCCAGTGATCTCTTCTGGGAAGCTGTTTGGCCTCGTCTATTAGCAAAAGGATGGCATTCTGAACAGCCTACGGCTTATACTTCTTTTGGTACAAAACAGTCTTTGGTTTTTCTTGTGCCTGGTGTTGAGAAGTTTTCGAGGGCGCTCGTAAATGGTAACCATTACTTCGATTCAGTAAGCGATATATTGACTAAAGTAGCATCCGATCCGGGTCTTATCGAGACTGAAATTCAAGCAACTGATGGCAGTGTAGATAGGGAAAACATTCTGGACAAACCATACCTAGATGGTGTGTCAAATAAGCAACATCATTTTTTCCTTCAACCTCATAGTTCGAAGTGCGATCAAGATCTCATGAAGTTTACAATTGTAGATACCAGCATGGTTCAGGATATGAATCAAAATGAAGTGAGAAAGCTAAGAAGCTTACCTTCTGAAACTGTGAGTGTATCTACCATCTCTAGCTGCTCTAATGAATCTGAGAAAAATACATCGGAAGACTCGAAATATCAGGTCGAACAAGCTAATGCTTCATGCCCTATTGAAGATCGCGTTGAAGTAGCTAATCCTTCATACCCTATTCAAGATCAGGTTGAGCATGCTAGTGCCGCGTACCTTATTGAAGAAGTTTTTGATAAGGGAGTGAGCATAGACTCATCACATTGTACTCCAATACCCGAGACCTTCAACATCGCCGAAGTAGAAGTACAAAATCATAAATTGCATTCTGATATGCATATTGACAAACATTCAAGGGAGATAAATGATCATCGGTCCATTCAAAACATGATATCTGATTGCTCAAACTCTTTGTCCTGCATGGAAATGCAGAAGTTAAGAGCTTGTAAACATGTAGAGTTTAGCCGATGCACCGAGAGTACTTCTATGAAGAGGAACTTCGATTTAAATAAGCCGACCTCAGAATCGGATCAGAATGACGCTTATGCTGAAGAAATTTCCGGAGAAAATTCTGAAACCAGGATGTTGATTGATTTGAATTTTCCTCAAGTTCCACAAGAGTTAGGAACTAATGTGGATATACCATCTTTTATGGTCATTATGCAAAATGACAACCAATGTGAAAATACATCATCCTTCACATCCGAGGTAACACAGCTCAATCGGATGCAGGAGTTTCCTTACGGCCACGAGGAGCAGCAACCGATAATCGCCAACCGTCGCCAGAGCACAAGGAACAGACCATTGACCACAAAAGCATTGGAAGCTATTGAGTATGGATTTCTCAACTCAAAGAGGAAGAGAAAAAAGAGTGCAGAATCTTCAGACAGTAATTTAAACTCCCGAACTTCGCACGCATGTAACAGAACATTTGTTAGCGCTGCGTGCGATAAGGGCATCGGAATTGCTATGGCTGGCACAAGAGAAGAGGGGAATGTTATCCAGGAATATAGATTTAGCATTGATCTTAATAGAGAGGCTCATTATAATTTTTGA 2526 0.4026 MNSVCYDDNKEDKSGEGSSSVEVDDDILGDWEKVPRIGDEYQAKIPSLVEAIYLPKPELPSPLVQAQCVTENSCGMLESFISEEGQVISYENALLVGEGKNVEKVSNFQSSSKCNETCIIVSYPEMKTEMDQSGGKDLLVHGFSVDQSWTDFEYNRFLLCLYVFGKKNFKFVKKFVGGKNMGDIMSFYYGKFYRSKGYRRWSVSRKLRSKRYICGKKMFTEWRQQELLSRLFPHVSGECQTMLVEGRPSARGSHLVGSEMVDVRSLIPISRNFAEDRMAFVEYIFALKDAVGIDLLVDAVGIGKGKQDLTSTAVEQTRTGDIFSLRPKIPITKARSSLTPPDIIKFLNGNFRLSKSRSSDLFWEAVWPRLLAKGWHSEQPTAYTSFGTKQSLVFLVPGVEKFSRALVNGNHYFDSVSDILTKVASDPGLIETEIQATDGSVDRENILDKPYLDGVSNKQHHFFLQPHSSKCDQDLMKFTIVDTSMVQDMNQNEVRKLRSLPSETVSVSTISSCSNESEKNTSEDSKYQVEQANASCPIEDRVEVANPSYPIQDQVEHASAAYLIEEVFDKGVSIDSSHCTPIPETFNIAEVEVQNHKLHSDMHIDKHSREINDHRSIQNMISDCSNSLSCMEMQKLRACKHVEFSRCTESTSMKRNFDLNKPTSESDQNDAYAEEISGENSETRMLIDLNFPQVPQELGTNVDIPSFMVIMQNDNQCENTSSFTSEVTQLNRMQEFPYGHEEQQPIIANRRQSTRNRPLTTKALEAIEYGFLNSKRKRKKSAESSDSNLNSRTSHACNRTFVSAACDKGIGIAMAGTREEGNVIQEYRFSIDLNREAHYNF 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1335 841 MobiDBLite consensus disorder prediction 1 24 - -
Lal3g1335 841 ProSiteProfiles SANT domain profile. 144 196 IPR017884 -
Lal3g1335 841 PANTHER ATROPHIN-RELATED 2 245 - -
Lal3g1335 841 PANTHER ATROPHIN-RELATED 674 826 - -
Lal3g1335 841 PANTHER ATROPHIN-RELATED 265 674 - -
Lal3g1335 841 SUPERFAMILY Homeodomain-like 148 198 IPR009057 -
Lal3g1335 841 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 2 245 - -
Lal3g1335 841 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 674 826 - -
Lal3g1335 841 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 265 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1335 Lal-Chr3 19156277 19160694 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1335 - - lang:109345984 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1335 3 19156277 19160694 Lal3g1335 3 19156277 19160694 ECH
Lal3g1335 3 19156277 19160694 Lal5g0278 5 2479627 2485071 LSH