Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0947 ATGGGTTGTAGTAAGAGAGAAATGTTAACAGAAAATCACAGTGAATCTGTTATGAGTGATGCTTTACTCTTCACTACCATCTGCATCATTGGTCTCCCTGTTGATGTTCATGTTAGGGATGGCTCTGTTTATTCTGGAATCTTCCACACTGCTTCCGTCGATGCCGATTACGGTGTTGTTTTGAAGAAAGCAAGGATGACTAAGAAGGGGATATTCAACACCAATGTGGGAACGGAAGTTGTTGTAGACACGCTAGTAATTCTAGCAAATGATCTTGTACAACTTGTTACTAAGGGAGTAACGCTTGATGGTGGAAATGTCACTCGTTATGATGAGGAAGCAGTAACGTGTGAGGTAGAGAATCATATTGGCTCTTTGATGGATGCAAAGCAGGATAATCAATCAAGGTCTCCCATCCAAATGGAAAATGGATTTGCCCATGGTTTTCCACGTTCAATAGCAGTGAATGAGCATGAAGGAGAAAAGTTGCCGGTTAATCACATGAGAACTTCCTTGGAACTTGATTGTGAGAAAACTAATAAAAAAGACTTCACAAAGATTGAAACAGACTCTGCTTCGTCTATCATTGACAGACAGGCTGGAGATGCCAAGTCAAAAAGGAAAGCTGATGACTGCAGAGAGAAGCCAGAGGTTGTTCAAGGAAAAATTGATGAAAAGATTCAAAACCTCAATTCAAGCCATGGAATTGATACAGATTTTGTCCAAGTTGAAGTTGTTGAGCATGGAAGCACATATATGATATCAAATAATTCTGATAATGGGTTATCCTGCGATAGTGCTGCTGCATCTGTTAAAGTTGATGACCGATGTAGTGAAAGGTCTACATCGGCAGACTCTGCTTCTACAAATTCCACCCAAGGTGTTGATTTCATCTCAGAGTCACATAATTTGCCACCAAAACCTGTTGAAATATCTACTCCAAGGGGTACCGGTTCTACCAGAAATGCTAAGGAATTTAAGCTCAACCCAGCTGCCAAAATTTTCTCTCCATCTTTCGTACATCCTAGTTCAGTAACTGCTGCTGTGCCAACAAGTCCAAACATGGTTTACGTGCCAAATAGCTCTCCTTCTGTATCTTTTACTGCCATTCAACCACAAGTTGGATTCAGTACTTTTGTTTCTCGGCCTCCTTTGCCTGTTAAAGTTGCAGAGTATAGTAACGTGAGTGTGGGAAATGGTGGCAGTGGTTCGCAACTTTCACAACCTATTATTGGACAATTGGCACACAGGACACAACCTCTACGTTATACTGCGCATTACACTCCTGATTTGTCTGAACCTGCTTATTTGCAACCAAGCTCTCCCACTGTTATGGTGGGACGTTCAGGACAGTTAGTTTATGTTCATCCAGTTTCTCATGAATTGGTTCATGGTGCAACGACTATCTCAGCAGTCTCAACTCGCCCTATGTCGAATCATGTACAATTTCCAAAACAACAAGGAGGCACAGTAGGTCAAGCAATTCAAGTCTGTGTGCCCCCACCTGTCCTATCAAGTGAGCAGCAATCCTATGCACTTCAGAGCCATATTCAGCTTTTGCAACCTACCTTTCCTACAACTCCACCTTTTTCAGCCTCTGTAACAAATGGTTTCTATGGCACTAAGTTTTCTTGA 1635 0.4183 MGCSKREMLTENHSESVMSDALLFTTICIIGLPVDVHVRDGSVYSGIFHTASVDADYGVVLKKARMTKKGIFNTNVGTEVVVDTLVILANDLVQLVTKGVTLDGGNVTRYDEEAVTCEVENHIGSLMDAKQDNQSRSPIQMENGFAHGFPRSIAVNEHEGEKLPVNHMRTSLELDCEKTNKKDFTKIETDSASSIIDRQAGDAKSKRKADDCREKPEVVQGKIDEKIQNLNSSHGIDTDFVQVEVVEHGSTYMISNNSDNGLSCDSAAASVKVDDRCSERSTSADSASTNSTQGVDFISESHNLPPKPVEISTPRGTGSTRNAKEFKLNPAAKIFSPSFVHPSSVTAAVPTSPNMVYVPNSSPSVSFTAIQPQVGFSTFVSRPPLPVKVAEYSNVSVGNGGSGSQLSQPIIGQLAHRTQPLRYTAHYTPDLSEPAYLQPSSPTVMVGRSGQLVYVHPVSHELVHGATTISAVSTRPMSNHVQFPKQQGGTVGQAIQVCVPPPVLSSEQQSYALQSHIQLLQPTFPTTPPFSASVTNGFYGTKFS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0947 544 MobiDBLite consensus disorder prediction 279 322 - -
Lal3g0947 544 MobiDBLite consensus disorder prediction 195 217 - -
Lal3g0947 544 PANTHER POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN 1 541 - -
Lal3g0947 544 MobiDBLite consensus disorder prediction 282 299 - -
Lal3g0947 544 PANTHER ATAXIN 2-RELATED 1 541 IPR045117 GO:0003723
Lal3g0947 544 MobiDBLite consensus disorder prediction 200 217 - -
Lal3g0947 544 Pfam Ataxin 2 SM domain 20 97 IPR025852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0947 Lal-Chr3 10132634 10143280 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0947 - - adu:107480281 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0947 3 10132634 10143280 Lal3g0947 3 10132634 10143280 ECH