Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0864 ATGGCTGCTCCAGTGGCAGCGGAGGGCGCCGTCGTCGCGGCGTTCCGGTCGGTGATGATGCGAGTCCGGCATGCGGCGGAGAGATCCAACTCCCAACTCGATCGGATTCGGGTCGTAGCCGTCTCCAAGACGAAACCCGTCTCCATGATCCGGCAACTCTACGACGCGGGTCACCGGAGCTTCGGCGAGAACTACGTTCAAGAAATCGTCGAGAAAGCTCCTCAGCTTCCACAAGATATTGAGTGGCATTTCATTGGACACTTGCAAAGCAACAAAGCCAAAACGCTTTTGGGCGGAGTTCCACATCTGGCCATGGTTGAGGGTGTTGACAATCAGAAGGTGGCAAATCATCTTGACCGCGTGGTTTCAACCCTTGGAAGGAATCCACTGAAGATTCTCGTGCAAGTAAATACCAGTGGAGAAGCATCCAAATCTGGTATTGACCCTTCCAATTGTGTTGAGCTTGCAAAACATGTGAAATCATGCTGCCCGAACCTAGTGTTCTCTGGCTTAATGACAATAGGGAGGCCTGACTATACCTCCACTCCGGAGAACTTCCAGTGCTTATCAAAGTGCAGAATGGAAGTTTGCGAGGCACTTGAAATGGATGAGGAGCAATGTGAACTGTCAATGGGCATGTCCAGCGATTTTGAGTTAGCGATTGAAATGGGAAGTACCAATGTGAGAATTGGGTCCACAATATTTGGACCAAGGGAGTATACGAAGAAACAAGAATAG 738 0.5027 MAAPVAAEGAVVAAFRSVMMRVRHAAERSNSQLDRIRVVAVSKTKPVSMIRQLYDAGHRSFGENYVQEIVEKAPQLPQDIEWHFIGHLQSNKAKTLLGGVPHLAMVEGVDNQKVANHLDRVVSTLGRNPLKILVQVNTSGEASKSGIDPSNCVELAKHVKSCCPNLVFSGLMTIGRPDYTSTPENFQCLSKCRMEVCEALEMDEEQCELSMGMSSDFELAIEMGSTNVRIGSTIFGPREYTKKQE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0864 245 CDD PLPDE_III_YBL036c_euk 16 236 - -
Lal3g0864 245 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 6 243 IPR011078 GO:0030170
Lal3g0864 245 Pfam Alanine racemase, N-terminal domain 22 238 IPR001608 -
Lal3g0864 245 PIRSF YBL036c_PLPDEIII 2 244 IPR011078 GO:0030170
Lal3g0864 245 Gene3D Alanine racemase 4 245 IPR029066 -
Lal3g0864 245 ProSitePatterns Uncharacterized protein family UPF0001 signature. 82 96 IPR011078 GO:0030170
Lal3g0864 245 TIGRFAM TIGR00044: pyridoxal phosphate enzyme, YggS family 20 238 IPR011078 GO:0030170
Lal3g0864 245 PANTHER PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEIN 6 243 - -
Lal3g0864 245 SUPERFAMILY PLP-binding barrel 11 236 IPR029066 -
Lal3g0864 245 Hamap Pyridoxal phosphate homeostasis protein. 13 237 IPR011078 GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0864 Lal-Chr3 8243368 8250619 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0864 K06997 - gmx:100793309 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0864 3 8243368 8250619 Lal3g0864 3 8243368 8250619 ECH