Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0838 ATGGCAGCACCGGATGCTCAACATCCCCCTCTTGGTGAAAACACATGTGGTTCCTTGTTAAATAAGCTGCAGGAAATATGGGATGAGGTCGGTGAGAGTGATGAGGAGCGGGACAAGATGCTACTTGAGATAGATCAGGAGTGTTTGGATGTGTACAAGAGAAAAGTTGAGCAGGCTGCTAAGTCAAGGGCACAGTTACTTCAATCCTTGTCTGATGCTAAGCTTATGCTTTCTAGTCTTCTATCCGCTCTCGGAGAAAAGAGCTTCGCCGGAATTCCCGAAAAGACTTCAGACACAATTAAGGAACAGCTTGAAGCTATAGCACCAATACTGGAACAGTTATGTAAACAAAAAGAGGAAAGAATAAAGGAGTTTTCAGATGTACAATCACAAATCCAAAAAATTTGTGGAGAGATAGCTGGGGACTTCAGCCCTAATGATCAGACAGGAACGTATGCAGTTGATGAGTCTGACCTGAGCCTGGAGAAGTTAGATGAATATCAATCCCAACTTCAAGAACTTCAAAAGGAAAAGAGTGAGAGATTGCACAAGGTTCTTGAACTTGTAAGTACTGTGCATGATCTTTGTGCTGTCCTTGGCATGGACTTCTATAGTACTGTGACTGAGGTTCATCCAAGCTTAGATGATTTTAAGAATGTTCATTCCAAAAGCATAAGCAACGGCACCCTTGCTAGGCTGGCTAAGACAGTCTTAACACTGAAAGAAGATAAGCAACATCGGCTGCACAAGCTCCAAGAATTAGCTTCGCAGTTAATTGATCTGTGGAATCTAATGGATACTCCTCTAGAGGAAAGGAGACTATTTGACCATGTTACCTGTAATATGTCAACTTCTGTGGATGAAGTCACTATTCCCGGGGCCCTTGCTCTGGATTTGATTGAGCAGGCTGAAGTAGAAGTTGAAAGACTTGATCAGCTGAAAGCCAGCAGGATGAAAGAAATTGCTTTCAAGAAGCAAACAGAACTTGAAGAGATATATGCCCATGCTCATGTAGAAATAGACCCAGAAGCAGCGCGAGATAGAATTATGTCAATGATTGATTCTGGAAACATTGAACCAACTGAATTACTGACTGACATGGACAATCAGATAGCGAAAGCGAAAGAAGAAGCTTTAAGCCGAAAAGATATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGATAATAGGTATAATGCAAGCAGAGGTGCACACTTAAACCTCAAACGTGCCGAGAAAGCTCGAATACTGGTCAACAAAATTCCTGCTTTGGTTGACACATTGGTTGCTAAAACACGTGCCTGGGAAGAAGCTCATGACATATCATTCACATATGATAGTGTTCCTCTTCTTGCTATGTTAGATGAATATGCCATTCTTCGGCATGAACGGGTAGAGGAAAAACGGAGGATGAAGGACCATAAAAAGTATCAAGAGCAGCAAAACACAGAGCCGGAACCCGTCTTTGGCTCACGATCCAGCCCTGCTCGGCCAATTAGCAACAAGAAGATTGCTGGTCCTCGCACAAATGGAGGGTCAAATGGTACACCTAATAAGCGACTCTCTTTGAATGCACATCAAAATGGTAGCCGATCCTCCACAAAAAATGGAAAAAGGGATAATACCAGACAATCTGCTCCCCTGGATTATGTGTTGCTGTCAAAAGAAGATGGTGCTTCCCATGTTTCTGGTGGAGAAACAGTCCCAACATCACCCTAA 1758 0.4283 MAAPDAQHPPLGENTCGSLLNKLQEIWDEVGESDEERDKMLLEIDQECLDVYKRKVEQAAKSRAQLLQSLSDAKLMLSSLLSALGEKSFAGIPEKTSDTIKEQLEAIAPILEQLCKQKEERIKEFSDVQSQIQKICGEIAGDFSPNDQTGTYAVDESDLSLEKLDEYQSQLQELQKEKSERLHKVLELVSTVHDLCAVLGMDFYSTVTEVHPSLDDFKNVHSKSISNGTLARLAKTVLTLKEDKQHRLHKLQELASQLIDLWNLMDTPLEERRLFDHVTCNMSTSVDEVTIPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQTELEEIYAHAHVEIDPEAARDRIMSMIDSGNIEPTELLTDMDNQIAKAKEEALSRKDILDKVEKWMSACEEESWLEDYNRDDNRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEEAHDISFTYDSVPLLAMLDEYAILRHERVEEKRRMKDHKKYQEQQNTEPEPVFGSRSSPARPISNKKIAGPRTNGGSNGTPNKRLSLNAHQNGSRSSTKNGKRDNTRQSAPLDYVLLSKEDGASHVSGGETVPTSP 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0838 585 Coils Coil 157 184 - -
Lal3g0838 585 Gene3D - 370 504 - -
Lal3g0838 585 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Lal3g0838 585 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 5 585 IPR007145 GO:0000226|GO:0008017
Lal3g0838 585 PANTHER MICROTUBULE-ASSOCIATED PROTEIN, MAP65/ASE1/PRC1-RELATED 5 585 - -
Lal3g0838 585 MobiDBLite consensus disorder prediction 519 556 - -
Lal3g0838 585 MobiDBLite consensus disorder prediction 482 585 - -
Lal3g0838 585 Coils Coil 300 320 - -
Lal3g0838 585 Coils Coil 101 121 - -
Lal3g0838 585 MobiDBLite consensus disorder prediction 495 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0838 Lal-Chr3 7679718 7685069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0838 13 561 EF-hand Containing Proteins AT5G62250 39.928 1.31e-118 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0838 K16732 - qsu:112012954 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0838 3 7679718 7685069 Lal3g0838 3 7679718 7685069 ECH
Lal3g0838 3 7679718 7685069 Lal22g0063 22 384768 388991 PCT
Lal22g0063 22 384768 388991 Lal3g0838 3 7679718 7685069 PCT