Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0836 ATGGGTCGTATGGCAGATAACGTTGTAGTGTCCTCCAATATGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGAAAAGGAGAATCCAGCTATGCCAACAATTCCCAAGCACAGGCCAGACATGCCAAGTCAATGCTTCACCTTCTAAAAGAAACCCTTGAGGAAGTTCAGCTTCATGACCCTGATACCCCATTTGTGGTTGTGGACTTAGGGTGCTCATGTGGCAGCAACACCATCAATGTGGTGGATGTGATCATCAAGCATGTGACCAAGCGCTATGAGGCTTTCGGATTAGACCAACCTGAGTTTTTAGCCTTCTTTTCAGACCTTCCAAGCAATGACTTCAACACCCTCTTCCAACTACTTCCTCCACTAGCCAACTATGGAGTTAGCATGGAAGACTGCCTTGCTGCAAATAACCACCGTTCCTACTTCGCCGCCGCTGTCCCGGGCTCTTTCTACCGGAGGCTTTTTCCGGCAAAGTCCATTAATATTTTTCATTCAGCCTTTTCTTTGCATTGGTTATCTAAGATGCCAGAAACTGTTCTAGACAAGAAATCAAGTGCATACAACAAAGGGAGGGTATTTATCCATGGTGCTAGTGAGATCACAGCAAATGCCTACAAGAAACAATTTCAGACAGATTTGAGAAGCTTCTTGAAAGCAAGGTCAGTGGAGATGAAGAAAGGAGGGTCCATGTTCTTGGTTTGTTTAGGCAGAACTTCAGTGGACCCCACAGACCAAGGTGGTGCTGGCCTCCTTTTTGGGACCCATTTTCAGGATGCATGGGATGATCTTGTCCAAGAGGGATTAATTAGCAGAGAGAAAAGAGACAATTTCAACATTCCAGTTTATGCACCAAGCTTGCAAGACTTCAAAGAGGTGGTTGAATCTGAAGGCTCATTCACCATAAACAAGCTTGAAGTTTTCAAAGGAGGAAGCCCCCTTGTTGTGAACCAGCCAGATGATGCAAATGAGATAGGCATGGCTCTAGCCAATAGTTGCAGGAGTGTGGCTGGAGTCCTTGTTGATGCACATATTGGAGACAAACTTAGTGATGAGTTGTTTCTTAGAGTGGCGCGCAGAGGCACAAGCCATGGCAAAGAGTTATTAGAGCAACTACAGTTCTTTCACATAGTTGCATCACTTTCATTTGCTCAACGAGAAGACACAAAGAAAAAGGCCTTCTATTCCTCTTCATTAGTTCAATCTTTTTTACCATCCCTCCCTTTGATTTTGTTTATTGTGTTGTGTTGTGTTTTACACTTTTGCTAG 1275 0.4431 MGRMADNVVVSSNMELERLLSMKGGKGESSYANNSQAQARHAKSMLHLLKETLEEVQLHDPDTPFVVVDLGCSCGSNTINVVDVIIKHVTKRYEAFGLDQPEFLAFFSDLPSNDFNTLFQLLPPLANYGVSMEDCLAANNHRSYFAAAVPGSFYRRLFPAKSINIFHSAFSLHWLSKMPETVLDKKSSAYNKGRVFIHGASEITANAYKKQFQTDLRSFLKARSVEMKKGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISREKRDNFNIPVYAPSLQDFKEVVESEGSFTINKLEVFKGGSPLVVNQPDDANEIGMALANSCRSVAGVLVDAHIGDKLSDELFLRVARRGTSHGKELLEQLQFFHIVASLSFAQREDTKKKAFYSSSLVQSFLPSLPLILFIVLCCVLHFC 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0836 424 Gene3D - 20 365 IPR042086 -
Lal3g0836 424 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 384 IPR029063 -
Lal3g0836 424 Pfam SAM dependent carboxyl methyltransferase 55 383 IPR005299 GO:0008168
Lal3g0836 424 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 11 385 IPR005299 GO:0008168
Lal3g0836 424 Gene3D Vaccinia Virus protein VP39 34 313 IPR029063 -
Lal3g0836 424 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 11 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0836 Lal-Chr3 7623730 7629780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0836 K18848 - gmx:100801476 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0836 3 7623730 7629780 Lal3g0836 3 7623730 7629780 ECH
Lal3g0836 3 7623730 7629780 Lal6g0061 6 371607 375670 PCT
Lal6g0061 6 371607 375670 Lal3g0836 3 7623730 7629780 PCT