Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0834 ATGGTAAAGACTAATGGCAATGTTTTGGTGCAGTTGCTTGTAGCAGCATTGTTCATTGCATTGTTGGGTAGTGCCAAAGCTGTTGTGTTGTGTAACATAGACTCAACTAACCTAAACTTATGCTATGCAGCAGTTACTGGGACACACCCTTCAAAACCTAATGCAAAATGCTGTGAAGTTATTCACCATGCTGATTTGCCTTGCCTTTGTGGTTACAAGTCTATCTTACCTGCACTTGGAATCAACCCTACAAATGCTTTGACCTTGCCCAAAAGATGTGGTCTGAAAACACCACCTCAATGTAAAGTGAACTGA 315 0.4127 MVKTNGNVLVQLLVAALFIALLGSAKAVVLCNIDSTNLNLCYAAVTGTHPSKPNAKCCEVIHHADLPCLCGYKSILPALGINPTNALTLPKRCGLKTPPQCKVN 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0834 104 CDD nsLTP_like 31 99 IPR044741 -
Lal3g0834 104 PANTHER LIPID TRANSFER PROTEIN 1 102 - -
Lal3g0834 104 Gene3D - 27 101 IPR036312 -
Lal3g0834 104 PANTHER LIPID BINDING PROTEIN-RELATED 1 102 IPR039265 GO:0005504|GO:0009627
Lal3g0834 104 SMART aai_6 31 101 IPR016140 -
Lal3g0834 104 Pfam Probable lipid transfer 25 100 IPR016140 -
Lal3g0834 104 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 102 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0834 Lal-Chr3 7603734 7604623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0834 21 101 Acyl Lipid Metabolism Gene Families AT5G48485 40.964 7.45e-18 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0834 - - gmx:100812796 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0834 3 7603734 7604623 Lal3g0834 3 7603734 7604623 ECH