Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0817 AAGGTGCCTCAAGCTCATAATGTCCTTGTCAAGGACAACATTGTCAAATCTTCTGAAGTGAAGGAATCAAACCAGAACATGAAAGATCTACAATGGGCACTACAAGCAATCAAATCCCAGAGCCAAAATCTGCACAGTGTTTCCTTTTACCTCTCCCAACCAAGTTCATGTTGTCACCAAGAAACAGAAAACTCCATAAAGATTAATATTTCAAAAGAGAACCTTTCATACTTCTCCAACTTCTTGACAACACTAGCAGCAACAAAATCCACCTTGAGAAACTTGGAGTTCCACCAAGTTGAATGGGAACCAGAACAGGTAAGAAACCTTGGCATATTTCTAGGGAATAACCAAAATGTAAAGCAAGTTGTTTTCAGAAGGAATAGATTCAATGGAAAAAGTGTAACAGAGCTTTCTGACATTCTGAGGAAAAATAAAGGGGTCAAAGAGATTACGATCTCAGAATCAGGTATTGGGTCTGTTGGAGCTGGACTCATTGCTTCTGCTCTTATGATGAATCATAGTTTAGAGGAGCTTCAGATATGGGAAGATTCAATTGGTTCAAGGGGTGCTGAGGAGCTTTCAAAGATGATTGAAGTTAACCCAACTCTTAAATTATTGACAATTTACGACTCGAATGCGGTTGCAGCTGCTCCTCTTATATCAGCAATTTTGGCAAGGAACAGGAGTATGGAACTTCATGTTTGGAGTGGAGAAAATGGAGAAAATAGTTCCAAGGTTGTAGAGTTTGTACCTGAGAATAGCACACTTAGAATTTACAAGCTTAACCTTTCAGGTACTTGCAGGGTAGCTTGCTCTCTAGGAATGAATTTAACGGTCAAGTCGCTTGACATGACTGGAGTCAAGATTAAATCCAGGTGTGCTAAGGAACTTAGATGGGTTTTAGAACAAAACCAGACCCTCGAAGAAGTTAACTTGTCCAGGACATGCCTTAAAGACAAGGGTGTTGTGTATGTTGCAGCAGGACTCTTTAAGAATCGTAGTCTACAAACCTTACATCTAACCGGAAATCGGTTCAGTGGGATAGGTGTGGAGCACCTACTTACCCCTCTGAGTAGATTTTCATCCCTACAAATGCAAGCTAATACAACTTTGAAGTGTGTCACTTTTGGAGGTGGGAAAACAAGAATAGGAAGGGATGGTCTAGTTGCTCTTATTCAGATGCTAACAACCAATGAGAGTGTGAGGCAATTGGGGATACATGATGATGAGAGTTTGAGATCAGATGACTTTGTTAAAATCTTCAAGAGTTTGGAGAAGAATGCTACTTTGAAGTGTTTAACTCTGCAAGGTTGCAAAGGTGTGCAGGGAGAGACATTACTGCAGACAATTATGGAGACACTACAGATAAATCCTTGGATTGAAGATATTGATCTCTCAAGAACACCTTTGCATAACTCTGGAAAGACTCAAGGGATTTATCTAAGATTGGGACAGAATGAGAAAACTGAACCTGAAGTTGATTTGCTTAAGGACATGCCACTAACACAGCCTAAGAGTTGCAGAGTTTTCTTTTGTGGGCAAGAATGTGCAGGCAAAACCACACTTTGTCATTCAATATCACAAAACTTCTCTGCCTCGGTGGTTCCCTATTTCGATCAAGTCAGAACAATAGTAAATCCAGTGGAGCAGGCAATTAAAACAGTAGGAATGAAGATAAAAACCTTCAAGGATGATGATATAAATATTTCAATATGGAATCTTGCTGGTCAGCATGAGTTTTTTTCCCTCCATGATCTTATGTTCCCAGGACATGGGAGTGCGTCATTTTTCGTCATCGTATCAAGTTTATTCAGGAAATCGAGTAACCGAGAACTGAGATCCACAACTGAGATTGAAGAGGACTTGCAATATTGGCTCAGGTTCATTGTTTCCAACTCCAAAAGAGCAATACAACAATGTGTGGTACCAAGTGTTGCTGTTGTTCTCACACACTTTGATAAAATCAACCAACCATCACAAAATTTGCAGCATACCGTAGACTCAATTCAGAGATTGAGAGACAAGTTCCAAGGATTTGTTGTTTTCTACCCAACCGTGTTCACAGTTGATGCAAGATCATCTGCATCAGTTAGTAAACTCACTCATCACATCCGAAAGACATGCAAGACAATTCTCCAAAGAGTACCGCGCGTTTATCAACTTTGCAATGATCTAATACAGATTTTATCGGACTGGAGATCCGAGAATTACAACAAGCCTGCAATGAAGTGGAAGGAATTTGGTGAGCTATGCCAAGTTAAGGTTCCACCTCTGAGAATTCAATCAAGGCATGGTAATAAAGAGAAAGTGGAAGCGAGGAGAAGAGCTATTGTTACTTGTCTTCATCACATTGGTGAGGTGATTTATTTTGATGAGTTGGGTTTTCTAATTTTAGATTGTGAGTGGTTCTGTGGTGAAGCACTTGGCCAGCTCATAAAATTAAATGTTCGAAGGCCACATTCGTCAGAAAACAATGGATTTATCAGCAGGAAGGAACTGGAGAAAATCTTAAGAGGAAGTTTACAAAGTCCAATTCCTGGTATTGGTTCAAAGGTGTTTGAGAACTTGGATCCTAGTGACCTTGTGAGGATGATGCTAAAACTTGAACTATGTTATGAGCAAGATCCATCAGATCCAAATTCTCTGTTGTTTATTCCTTCCATTCTTGAAGAAGGAAGAGGAAAGCCTCAAAGATGGCTGCAAACCACACCAGACTGCCTTTATGTGGGGCGTCATCTTGAGTGTGACGATTCAAGCCACATGTTTCTAACTCCAGGATTCTTCCCTCGTTTACAGGCATGA 2805 0.4021 KVPQAHNVLVKDNIVKSSEVKESNQNMKDLQWALQAIKSQSQNLHSVSFYLSQPSSCCHQETENSIKINISKENLSYFSNFLTTLAATKSTLRNLEFHQVEWEPEQVRNLGIFLGNNQNVKQVVFRRNRFNGKSVTELSDILRKNKGVKEITISESGIGSVGAGLIASALMMNHSLEELQIWEDSIGSRGAEELSKMIEVNPTLKLLTIYDSNAVAAAPLISAILARNRSMELHVWSGENGENSSKVVEFVPENSTLRIYKLNLSGTCRVACSLGMNLTVKSLDMTGVKIKSRCAKELRWVLEQNQTLEEVNLSRTCLKDKGVVYVAAGLFKNRSLQTLHLTGNRFSGIGVEHLLTPLSRFSSLQMQANTTLKCVTFGGGKTRIGRDGLVALIQMLTTNESVRQLGIHDDESLRSDDFVKIFKSLEKNATLKCLTLQGCKGVQGETLLQTIMETLQINPWIEDIDLSRTPLHNSGKTQGIYLRLGQNEKTEPEVDLLKDMPLTQPKSCRVFFCGQECAGKTTLCHSISQNFSASVVPYFDQVRTIVNPVEQAIKTVGMKIKTFKDDDINISIWNLAGQHEFFSLHDLMFPGHGSASFFVIVSSLFRKSSNRELRSTTEIEEDLQYWLRFIVSNSKRAIQQCVVPSVAVVLTHFDKINQPSQNLQHTVDSIQRLRDKFQGFVVFYPTVFTVDARSSASVSKLTHHIRKTCKTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQVKVPPLRIQSRHGNKEKVEARRRAIVTCLHHIGEVIYFDELGFLILDCEWFCGEALGQLIKLNVRRPHSSENNGFISRKELEKILRGSLQSPIPGIGSKVFENLDPSDLVRMMLKLELCYEQDPSDPNSLLFIPSILEEGRGKPQRWLQTTPDCLYVGRHLECDDSSHMFLTPGFFPRLQA 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0817 934 Gene3D - 507 712 IPR027417 -
Lal3g0817 934 SMART LRR_RI_2 145 172 - -
Lal3g0817 934 SMART LRR_RI_2 305 332 - -
Lal3g0817 934 SMART LRR_RI_2 173 200 - -
Lal3g0817 934 SMART LRR_RI_2 333 360 - -
Lal3g0817 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 709 IPR027417 -
Lal3g0817 934 Pfam Ras of Complex, Roc, domain of DAPkinase 509 637 - -
Lal3g0817 934 SUPERFAMILY RNI-like 42 476 - -
Lal3g0817 934 Coils Coil 20 40 - -
Lal3g0817 934 PANTHER PROTEIN TORNADO 1 23 934 - -
Lal3g0817 934 Pfam Leucine Rich repeat 304 325 IPR001611 GO:0005515
Lal3g0817 934 Pfam Leucine Rich repeat 332 354 IPR001611 GO:0005515
Lal3g0817 934 Pfam C-terminal of Roc, COR, domain 770 906 IPR032171 -
Lal3g0817 934 Gene3D Ribonuclease Inhibitor 367 493 IPR032675 -
Lal3g0817 934 Gene3D Ribonuclease Inhibitor 239 366 IPR032675 -
Lal3g0817 934 Gene3D Ribonuclease Inhibitor 60 234 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0817 - - gmx:100817598 1599.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0817 3 7490250 7493506 Lal3g0817 3 7490250 7493506 ECH