Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0806 ATGAACGTGGGCGATCTCAACAAGGTTTGGGAAATCAAAGCACTGAAGAGGAAACCTGGGGAAGATGAAGCCACAAAAATGTTGGATAAGATCGCTAAACAGGTCCAACCTATCATGCGTAAACATAAATGGAGGGTCAAGCTTCTCTCTGAATTCTGTCCAACCAATCCACGTCTTCTGGGGTTGAATGTTGGAGCTGGTATACATGTGAAGTTGCGGCTACGAAGACCCAACAGAGATTTGGACTTTTACCCATTTGATCAAGTTCTGGATACAATGCTTCATGAGCTTTGTCATAACGCCCATGGTCCTCATAATGCCAACTTCTACAAGCTTTGGGATGAGCTTAGAACGGAATGTGAGGAGCTGATGTCTAAGGGTGTAATTGGCACAGGAGAGGGGTTTGACCTTAAAGGAAGGCGTTTAGGTGGCTTTTCCCGACAACCTCCACTTTCCTCTCTCCGTATAACTGCACTGGCAGCTGCAGAAAAGAGATCGCAACTGAGATCTCTCCTTCCATCTGGATCCAATCGTCTTGGTGGTGATAGTATTATAATGAAGGCACTTAGTCCAGTGCAAGCTGCTGCAATGGCTGCAGAAAGGAGATTACAGGATGACATATGGTGTGCTTCTCAATCTTGTGAACCTTCGGATTATGATGTTAACCATGAATCTGTTGATAACCTTGTACATAAGGGGGAGAATATGGGAAAGTCAAGACTAGCAAACAATTCTATCCTACCTTCAGGGATATCCCGAAAGCGAAGTCGTGTTATGGATTCAAGTTTACTGGCTAACTCATCTAGTACCACGAAATTTGTAGATTTGACTCTGGGTAGTCCAAAAATTGTAGATTTGACTCGATCTCAAGGAAGAAGTTTTGGAGTAGAAAGCATCTCACATTCTCACTCTCGTTCTCAGGCAGGATCCAGTTCTGCAAACATATCCAGTTCACCAGGGTCACTATCTAGTGATGAAAGAGCACTTCATTCTGAAGAGCCTGCAATGTGGGGTTGTCTGACTTGCACCCTGTTGAATAAAGCGCTAGCTCCGGTATGTGAGTTGTGTGGAACACAACAGCCAAAAGATGTTGCTACCAAGTATAAAATGTGGTCTTGTAAGTTCTGTACGTTGGAAAACAGTGTGAAGTTGGAGAAATGCTCAGCCTGTGATCAGTGGAGGTACTCTCTTGGTCAACCAGTGTCAACTGGGGCACCTAACCTTGGCACTTGA 1233 0.4453 MNVGDLNKVWEIKALKRKPGEDEATKMLDKIAKQVQPIMRKHKWRVKLLSEFCPTNPRLLGLNVGAGIHVKLRLRRPNRDLDFYPFDQVLDTMLHELCHNAHGPHNANFYKLWDELRTECEELMSKGVIGTGEGFDLKGRRLGGFSRQPPLSSLRITALAAAEKRSQLRSLLPSGSNRLGGDSIIMKALSPVQAAAMAAERRLQDDIWCASQSCEPSDYDVNHESVDNLVHKGENMGKSRLANNSILPSGISRKRSRVMDSSLLANSSSTTKFVDLTLGSPKIVDLTRSQGRSFGVESISHSHSRSQAGSSSANISSSPGSLSSDERALHSEEPAMWGCLTCTLLNKALAPVCELCGTQQPKDVATKYKMWSCKFCTLENSVKLEKCSACDQWRYSLGQPVSTGAPNLGT 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0806 410 MobiDBLite consensus disorder prediction 297 325 - -
Lal3g0806 410 ProSitePatterns Zinc finger RanBP2-type signature. 371 390 IPR001876 -
Lal3g0806 410 ProSitePatterns Zinc finger RanBP2-type signature. 337 356 IPR001876 -
Lal3g0806 410 ProSiteProfiles Zinc finger RanBP2 type profile. 367 396 IPR001876 -
Lal3g0806 410 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 1 410 - -
Lal3g0806 410 MobiDBLite consensus disorder prediction 297 327 - -
Lal3g0806 410 Pfam Zn-finger in Ran binding protein and others 336 361 IPR001876 -
Lal3g0806 410 Pfam Zn-finger in Ran binding protein and others 369 391 IPR001876 -
Lal3g0806 410 Gene3D - 330 370 - -
Lal3g0806 410 SMART zf_4 335 359 IPR001876 -
Lal3g0806 410 SMART zf_4 369 393 IPR001876 -
Lal3g0806 410 Pfam WLM domain 8 204 IPR013536 -
Lal3g0806 410 ProSiteProfiles WLM domain profile. 1 204 IPR013536 -
Lal3g0806 410 SUPERFAMILY Ran binding protein zinc finger-like 332 360 IPR036443 -
Lal3g0806 410 ProSiteProfiles Zinc finger RanBP2 type profile. 333 362 IPR001876 -
Lal3g0806 410 PANTHER ZINC ION BINDING PROTEIN 1 410 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0806 K22685 - gmx:100795976 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0806 3 7340241 7345240 Lal3g0806 3 7340241 7345240 ECH